RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 MCRIP2Q9BUT9 160 aaKnown RBP14.8□□□□□ -0.04
SF3A1-205ENST00000463818 JPT1Q9UK76 154 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 LRRC42Q9Y546 428 aa14.8□□□□□ -0.04
SF3A1-205ENST00000463818 RRP9O43818 475 aaKnown RBP14.79□□□□□ -0.04
SF3A1-205ENST00000463818 YPEL1O60688 119 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 ELANEP08246 267 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 HTR2CP28335 458 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 RPS27AP62979 156 aaKnown RBP14.79□□□□□ -0.04
SF3A1-205ENST00000463818 FOXE3Q13461 319 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 HSD17B12Q53GQ0 312 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 CXorf66Q5JRM2 361 aaPredicted RBP14.79□□□□□ -0.04
SF3A1-205ENST00000463818 C6orf201Q7Z4U5 140 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 ODF3L1Q8IXM7 274 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 KCNG3Q8TAE7 436 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 GALMQ96C23 342 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 RITA1Q96K30 269 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 YPEL2Q96QA6 119 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 TMEM59Q9BXS4 323 aa14.79□□□□□ -0.04
SF3A1-205ENST00000463818 CCL24O00175 119 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 RGS11O94810 467 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 CD37P11049 281 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 CDX1P47902 265 aaPredicted RBP14.78□□□□□ -0.04
SF3A1-205ENST00000463818 MED22Q15528 200 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 LY6G6FQ5SQ64 297 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 PRSS48Q7RTY5 328 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 RNF152Q8N8N0 203 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 CNBD2Q96M20 576 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 NABP2Q9BQ15 211 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 KCNK15Q9H427 330 aa14.78□□□□□ -0.04
SF3A1-205ENST00000463818 UCHL1P09936 223 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 SLC2A2P11168 524 aaPredicted RBP14.77□□□□□ -0.05
SF3A1-205ENST00000463818 VDAC1P21796 283 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 OR3A3P47888 321 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 QRFPP83859 136 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 CFHR3Q02985 330 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 UNC119Q13432 240 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 KIR2DS1Q14954 304 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 MMDQ15546 238 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 TMEM203Q969S6 136 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 KCTD7Q96MP8 289 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 NICN1Q9BSH3 213 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 TM2D1Q9BX74 207 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 MRPL20Q9BYC9 149 aaKnown RBP14.77□□□□□ -0.05
SF3A1-205ENST00000463818 ABRACLQ9P1F3 81 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 ZNF107Q9UII5 783 aaPredicted RBP14.77□□□□□ -0.05
SF3A1-205ENST00000463818 BLOC1S6Q9UL45 172 aa14.77□□□□□ -0.05
SF3A1-205ENST00000463818 TMEM14DPA8MWL7 114 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 SLC22A1O15245 554 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 RGS10O43665 173 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 IGHG4P01861 327 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 IGF1P05019 195 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 BLVRBP30043 206 aaPredicted RBP14.76□□□□□ -0.05
SF3A1-205ENST00000463818 RAB25P57735 213 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 GABARAPL2P60520 117 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 ACTBP60709 375 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 HMGN3Q15651 99 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 LIPKQ5VXJ0 399 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 ZNF833PQ6ZTB9 187 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 OR2AK2Q8NG84 335 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 ZNF251Q9BRH9 671 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 Q9H521 79 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 ISYNA1Q9NPH2 558 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 PLEKHJ1Q9NW61 149 aa14.76□□□□□ -0.05
SF3A1-205ENST00000463818 MRPS14O60783 128 aaKnown RBP14.75□□□□□ -0.05
SF3A1-205ENST00000463818 NAPSAO96009 420 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 CNTFRP26992 372 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 TBCEQ15813 527 aaPredicted RBP14.75□□□□□ -0.05
SF3A1-205ENST00000463818 DEFB136Q30KP8 78 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 ZNF880Q6PDB4 577 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 OR8U1Q8NH10 309 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 IL1F10Q8WWZ1 152 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 UFD1Q92890 307 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 CHMP1AQ9HD42 196 aaPredicted RBP14.75□□□□□ -0.05
SF3A1-205ENST00000463818 WSB1Q9Y6I7 421 aa14.75□□□□□ -0.05
SF3A1-205ENST00000463818 A0A0A6YYD4 124 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 BPNT1O95861 308 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 TMEM91Q6ZNR0 172 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 SVOPQ8N4V2 548 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 OR6M1Q8NGM8 313 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 SETD6Q8TBK2 473 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 CHCHD6Q9BRQ6 235 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 STEAP1Q9UHE8 339 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 ZNF580Q9UK33 172 aa14.74□□□□□ -0.05
SF3A1-205ENST00000463818 SAA2-SAA4A0A096LPE2 208 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 ST8SIA5O15466 376 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 SOCS1O15524 211 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 HSMCR30P0CW71 290 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 SAA2P0DJI9 122 aaPredicted RBP14.73□□□□□ -0.05
SF3A1-205ENST00000463818 OR5H8P0DN80 308 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 PSMB8P28062 276 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 TPBGQ13641 420 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 P2RY14Q15391 338 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 GFI1Q99684 422 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 URM1Q9BTM9 101 aaKnown RBP14.73□□□□□ -0.05
SF3A1-205ENST00000463818 YTHDF1Q9BYJ9 559 aaKnown RBP14.73□□□□□ -0.05
SF3A1-205ENST00000463818 LPAR5Q9H1C0 372 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 IFI27L2Q9H2X8 130 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 OR51J1Q9H342 316 aa14.73□□□□□ -0.05
SF3A1-205ENST00000463818 RIMS4Q9H426 269 aaPredicted RBP14.73□□□□□ -0.05
SF3A1-205ENST00000463818 PLGRKTQ9HBL7 147 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms