RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 EGR2P11161 476 aaPredicted RBP11.05□□□□□ -0.64
SMC1A-204ENST00000463684 FASP25445 335 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 ADARB1P78563 741 aaKnown RBP11.05□□□□□ -0.64
SMC1A-204ENST00000463684 MEDAGQ5VYS4 303 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 SYS1Q8N2H4 156 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 MRPS24Q96EL2 167 aaKnown RBP11.05□□□□□ -0.64
SMC1A-204ENST00000463684 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 GABARAPL3Q9BY60 117 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 FBXL15Q9H469 300 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 ISG20L2Q9H9L3 353 aaKnown RBP11.05□□□□□ -0.64
SMC1A-204ENST00000463684 TAF9BQ9HBM6 251 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 TMEM138Q9NPI0 162 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 KCNIP1Q9NZI2 227 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 EXOGQ9Y2C4 368 aaKnown RBP11.05□□□□□ -0.64
SMC1A-204ENST00000463684 CEPT1Q9Y6K0 416 aa11.05□□□□□ -0.64
SMC1A-204ENST00000463684 C13orf42A0A1B0GVH6 325 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 SHISA3A0PJX4 238 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 FCN1O00602 326 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 RRHO14718 337 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 LY6G6CO95867 125 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 TFAP2AP05549 437 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 RCC1P18754 421 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-204ENST00000463684 GBX2P52951 348 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-204ENST00000463684 GYS2P54840 703 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 PPP3R1P63098 170 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 KLF5Q13887 457 aaPredicted RBP11.04□□□□□ -0.64
SMC1A-204ENST00000463684 GPR176Q14439 515 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 DNAL1Q4LDG9 190 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 SLC22A6Q4U2R8 563 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 SLC25A30Q5SVS4 291 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 DDI2Q5TDH0 399 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 ZNF833PQ6ZTB9 187 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 ODF3L1Q8IXM7 274 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 OR52L2PQ8NGH6 319 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 FAM103A1Q9BTL3 118 aaKnown RBP11.04□□□□□ -0.64
SMC1A-204ENST00000463684 ZNF355PQ9NSJ1 428 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 JPT1Q9UK76 154 aa11.04□□□□□ -0.64
SMC1A-204ENST00000463684 E9PI62 339 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 CA11O75493 328 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 PPP1CCP36873 323 aaKnown RBP11.03□□□□□ -0.64
SMC1A-204ENST00000463684 OR3A3P47888 321 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 GNMTQ14749 295 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 MOGAT2Q3SYC2 334 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 RNLSQ5VYX0 342 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 RAB12Q6IQ22 244 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 AMIGO2Q86SJ2 522 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 Q8N402 240 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 CCDC197Q8NCU1 140 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 GPR148Q8TDV2 347 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 LINC00476Q8WZB0 136 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 RDH12Q96NR8 316 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 CLCC1Q96S66 551 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 PEX16Q9Y5Y5 336 aa11.03□□□□□ -0.64
SMC1A-204ENST00000463684 A0A0G2JLM5 398 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 A0A1W2PP11 408 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 ANKRD34BA5PLL1 514 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 YPEL1O60688 119 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 FADS2O95864 444 aaKnown RBP11.02□□□□□ -0.65
SMC1A-204ENST00000463684 GSTP1P09211 210 aaKnown RBP11.02□□□□□ -0.65
SMC1A-204ENST00000463684 BDKRB2P30411 391 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 SNRPGP62308 76 aaKnown RBP11.02□□□□□ -0.65
SMC1A-204ENST00000463684 HTD2P86397 168 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 FAM131AQ6UXB0 335 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 ZNF554Q86TJ5 538 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 GAPTQ8N292 157 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 OR2AK2Q8NG84 335 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 DDB2Q92466 427 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 TMEM106AQ96A25 262 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 LGALS12Q96DT0 336 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 YPEL2Q96QA6 119 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 THAP7Q9BT49 309 aaPredicted RBP11.02□□□□□ -0.65
SMC1A-204ENST00000463684 RCC2Q9P258 522 aaKnown RBP11.02□□□□□ -0.65
SMC1A-204ENST00000463684 GAB2Q9UQC2 676 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 AP4S1Q9Y587 144 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 GMPPBQ9Y5P6 360 aa11.02□□□□□ -0.65
SMC1A-204ENST00000463684 SAA2-SAA4A0A096LPE2 208 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 TPPPO94811 219 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 CNIH1O95406 144 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 MAS1P04201 325 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 SAA2P0DJI9 122 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-204ENST00000463684 MC5RP33032 325 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 SYNJ2BPP57105 145 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 IL34Q6ZMJ4 242 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 LINC00322Q6ZN03 302 aaPredicted RBP11.01□□□□□ -0.65
SMC1A-204ENST00000463684 GALMQ96C23 342 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 PLEKHA3Q9HB20 300 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 SIGLEC8Q9NYZ4 499 aa11.01□□□□□ -0.65
SMC1A-204ENST00000463684 ALMS1Q8TCU4 4167 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 UBE2QL1A1L167 161 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 H7C2Y5 167 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 ATP8B1O43520 1251 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 RBBP9O75884 186 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 FCGR1AP12314 374 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 CD81P60033 236 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 LY6G6FQ5SQ64 297 aa11□□□□□ -0.65
SMC1A-204ENST00000463684 FAM71F2Q6NXP2 309 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms