RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 LHX4Q969G2 390 aa15.66■□□□□ 0.1
HPS3-204ENST00000462030 LSM10Q969L4 123 aaKnown RBP15.66■□□□□ 0.1
HPS3-204ENST00000462030 RPUSD4Q96CM3 377 aaKnown RBP15.66■□□□□ 0.1
HPS3-204ENST00000462030 SGCZQ96LD1 299 aa15.66■□□□□ 0.1
HPS3-204ENST00000462030 RIMS4Q9H426 269 aaPredicted RBP15.66■□□□□ 0.1
HPS3-204ENST00000462030 IFNA1P01562 189 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 P2RY6Q15077 328 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 CYP2G1PQ6ZSU1 146 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 RPP25LQ8N5L8 163 aaKnown RBP15.65■□□□□ 0.1
HPS3-204ENST00000462030 PRSS50Q9UI38 385 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 VPS13AQ96RL7 3174 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 TRBV6-6A0A0A6YYG2 114 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 PINLYPA6NC86 204 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 SLC31A2O15432 143 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 SELLP14151 372 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 RTP5Q14D33 572 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 HLA-BQ31612 363 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 ACSF3Q4G176 576 aaPredicted RBP15.65■□□□□ 0.1
HPS3-204ENST00000462030 ZNF585BQ52M93 769 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 SPEM1Q8N4L4 309 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 ELOVL1Q9BW60 279 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 DLL3Q9NYJ7 618 aa15.65■□□□□ 0.1
HPS3-204ENST00000462030 DVL1O14640 695 aa15.64■□□□□ 0.09
HPS3-204ENST00000462030 MRPL33O75394 65 aaKnown RBP15.64■□□□□ 0.09
HPS3-204ENST00000462030 MEF2BQ02080 365 aaPredicted RBP15.64■□□□□ 0.09
HPS3-204ENST00000462030 TESK1Q15569 626 aa15.64■□□□□ 0.09
HPS3-204ENST00000462030 TMEM241Q24JQ0 296 aa15.64■□□□□ 0.09
HPS3-204ENST00000462030 IFI44Q8TCB0 444 aa15.64■□□□□ 0.09
HPS3-204ENST00000462030 TAF15Q92804 592 aaKnown RBP eCLIP15.64■□□□□ 0.09
HPS3-204ENST00000462030 PYGO2Q9BRQ0 406 aa15.64■□□□□ 0.09
HPS3-204ENST00000462030 GDF1P27539 372 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 RPL23P62829 140 aaKnown RBP15.63■□□□□ 0.09
HPS3-204ENST00000462030 BSXQ3C1V8 233 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 OR8G2PQ6IF36 304 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 HIST1H2AAQ96QV6 131 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 SLC39A9Q9NUM3 307 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 KCNS2Q9ULS6 477 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 MKRN2OSH3BPM6 223 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 KBTBD11O94819 623 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 SLC38A11Q08AI6 406 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 Q0VFX4 171 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 DBX2Q6ZNG2 339 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 OR5A2Q8NGI9 324 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 OR51G1Q8NGK1 321 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
HPS3-204ENST00000462030 PINX1Q96BK5 328 aaKnown RBP15.63■□□□□ 0.09
HPS3-204ENST00000462030 MISP3Q96FF7 219 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 AGMATQ9BSE5 352 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 SLC25A22Q9H936 323 aa15.63■□□□□ 0.09
HPS3-204ENST00000462030 XKRY2A2RUG3 117 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 K7ESF4 209 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 FGF7P21781 194 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 GALR1P47211 349 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 TAS2R60P59551 318 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 ACSM6Q6P461 480 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 ZNF664Q8N3J9 261 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 GATAD1Q8WUU5 269 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 APOBEC3DQ96AK3 386 aaPredicted RBP15.62■□□□□ 0.09
HPS3-204ENST00000462030 DEGS1O15121 323 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 RHBDL1O75783 438 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 WNT2P09544 360 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 FOLR3P41439 243 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 TCEAL6Q6IPX3 200 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.62■□□□□ 0.09
HPS3-204ENST00000462030 FAM58AQ8N1B3 248 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 OR5P3Q8WZ94 311 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 TMEM45BQ96B21 275 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 PCGF1Q9BSM1 259 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 TMEM9BQ9NQ34 198 aa15.62■□□□□ 0.09
HPS3-204ENST00000462030 RBM7Q9Y580 266 aaKnown RBP15.62■□□□□ 0.09
HPS3-204ENST00000462030 H7BYZ3 331 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.61■□□□□ 0.09
HPS3-204ENST00000462030 WDR1O75083 606 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 SNRPCP09234 159 aaKnown RBP15.61■□□□□ 0.09
HPS3-204ENST00000462030 APLNRP35414 380 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 SRYQ05066 204 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 NRN1LQ496H8 165 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 ZNF66Q6ZN08 573 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 PARLQ9H300 379 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 OR51B6Q9H340 312 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 PIGBOS1A0A0B4J2F0 54 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 A8MWP6 167 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 SS18L1O75177 396 aaPredicted RBP15.61■□□□□ 0.09
HPS3-204ENST00000462030 GFRA1P56159 465 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 LINC00596Q86U02 117 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 MED12LQ86YW9 2145 aa15.61■□□□□ 0.09
HPS3-204ENST00000462030 A0A1W2PPQ1 181 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 PPP5D1E7EU14 171 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 ST8SIA5O15466 376 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 PARD6GQ9BYG4 376 aaPredicted RBP15.6■□□□□ 0.09
HPS3-204ENST00000462030 ACTR3CQ9C0K3 210 aaPredicted RBP15.6■□□□□ 0.09
HPS3-204ENST00000462030 DOCK7Q96N67 2140 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 A0A1W2PR80 420 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 OTX2P32243 289 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 Q3ZCU0 254 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 RAB24Q969Q5 203 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 LIN7CQ9NUP9 197 aaKnown RBP15.6■□□□□ 0.09
HPS3-204ENST00000462030 R4GN57 208 aa15.6■□□□□ 0.09
HPS3-204ENST00000462030 ZNF705GA8MUZ8 300 aaPredicted RBP15.59■□□□□ 0.09
HPS3-204ENST00000462030 NPIPB11E5RHQ5 1161 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms