RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 RAB18Q9NP72 206 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 FBXL7Q9UJT9 491 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 TRAPPC1Q9Y5R8 145 aa5.04□□□□□ -1.6
CLK1-207ENST00000461981 ZNF716A6NP11 495 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 HMGN4O00479 90 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 ZNF207O43670 478 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 PDE6DO43924 150 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 C8orf89P0DMQ9 161 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 RPS4Y1P22090 263 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 ARL3P36405 182 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 P2RY1P47900 373 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 PPP1CAP62136 330 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 PLAURQ03405 335 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 TFF3Q07654 80 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 PNRC1Q12796 327 aaPredicted RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 MLC1Q15049 377 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLK1-207ENST00000461981 LRRC10Q5BKY1 277 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 PRR31Q5SQ13 230 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 FAM90A2PQ658T7 463 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR4C11Q6IEV9 310 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 TCF24Q7RTU0 167 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 ANKRD37Q7Z713 158 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 ZDHHC22Q8N966 263 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR51A4Q8NGJ6 313 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR51G1Q8NGK1 321 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR2A1Q8NGT9 310 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR10AC1Q8NH08 325 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 UBTD2Q8WUN7 234 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 FAM3DQ96BQ1 224 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR2A5Q96R48 311 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 CTDSP1Q9GZU7 261 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 PLK3Q9H4B4 646 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 ZDHHC11Q9H8X9 412 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 FAM60AQ9NP50 221 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 KCNE3Q9Y6H6 103 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 VCANP13611 3396 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 SERF1AO75920 110 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 CCL2P13500 99 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 UBE2NP61088 152 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 PMPCAQ10713 525 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 GGTA1PQ4G0N0 100 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 RAET1LQ5VY80 246 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 TRAPPC6BQ86SZ2 158 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 COMMD2Q86X83 199 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 CSNK1A1LQ8N752 337 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 PLPP7Q8NBV4 271 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 OR10G3Q8NGC4 313 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 ST6GALNAC6Q969X2 333 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 LMF2Q9BU23 707 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 CHRDL1Q9BU40 450 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 SDF2L1Q9HCN8 221 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 NRN1Q9NPD7 142 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 EHFQ9NZC4 300 aa5.03□□□□□ -1.6
CLK1-207ENST00000461981 MRPL27Q9P0M9 148 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 HELZ2Q9BYK8 2649 aaKnown RBP5.03□□□□□ -1.6
CLK1-207ENST00000461981 IGKV3D-11A0A0A0MRZ8 115 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 GAGE10A6NGK3 116 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 RIIAD1A6NNX1 92 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 MSTNO14793 375 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 SMIM10L1P0DMW3 83 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 HOXB4P17483 251 aaPredicted RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 ZNF93P35789 620 aaPredicted RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 RELBQ01201 579 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 PSG3Q16557 428 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 LTC4SQ16873 150 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 Q499Y3 187 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TMEM128Q5BJH2 165 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 ZNF506Q5JVG8 444 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 GPR157Q5UAW9 335 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 DPY19L4Q7Z388 723 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 SLC35F2Q8IXU6 374 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 OR2T10Q8NGZ9 312 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 CLDND2Q8NHS1 167 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 BLNKQ8WV28 456 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 SMIM10Q96HG1 83 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TAAR6Q96RI8 345 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 A4GALTQ9NPC4 353 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 MRPS16Q9Y3D3 137 aaKnown RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 IGHV2-26A0A0B4J1V2 119 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 MUC21A0A0G2JKD1 596 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 MUC21A0A140T8X8 626 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 HCRTR1O43613 425 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 DEDDO75618 318 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 PSMB5P28074 263 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 OTX1P32242 354 aaPredicted RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 MANFP55145 182 aaKnown RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 SSBP1Q04837 148 aaKnown RBP5.02□□□□□ -1.61
CLK1-207ENST00000461981 MSMO1Q15800 293 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 HIST3H3Q16695 136 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 PCK2Q16822 640 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 MUC21Q5SSG8 566 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 ZNF684Q5T5D7 378 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 GTF2H5Q6ZYL4 71 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 TCF23Q7RTU1 214 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 LRRC70Q7Z2Q7 622 aa5.02□□□□□ -1.61
CLK1-207ENST00000461981 COMMD6Q7Z4G1 85 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms