RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 SELLP14151 372 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 GZMHP20718 246 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 NFYBP25208 207 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 GPR12P47775 334 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 UQCRFS1P47985 274 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 AKR1C2P52895 323 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 VAMP2P63027 116 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 CATR1Q13166 79 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 EXOSC2Q13868 293 aaKnown RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 HFEQ30201 348 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 ZNF672Q499Z4 452 aaPredicted RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 KIAA2026Q5HYC2 2103 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 STUMQ69YW2 141 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 PRSS54Q6PEW0 395 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 TMEM65Q6PI78 240 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 TEX261Q6UWH6 196 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 BTNL3Q6UXE8 466 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 SELENOHQ8IZQ5 122 aaKnown RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 MUC15Q8N387 334 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 KCNRGQ8N5I3 272 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 ZNF645Q8N7E2 425 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 FAM216BQ8N7L0 139 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 ZNF680Q8NEM1 530 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 OR1S1Q8NH92 325 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 ANGPTL6Q8NI99 470 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 GLYATL2Q8WU03 294 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 TCTEX1D2Q8WW35 142 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 H1FXQ92522 213 aaKnown RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 C14orf79Q96F83 325 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 C18orf12Q96KH6 178 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 GAFA1Q96PS6 74 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 ZNF471Q9BX82 626 aaPredicted RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 SHARPINQ9H0F6 387 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 PARP12Q9H0J9 701 aaKnown RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 ZFP57Q9NU63 452 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 TMEM106BQ9NUM4 274 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 LIN7CQ9NUP9 197 aaKnown RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 CALYQ9NYX4 217 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 OR5AC2Q9NZP5 309 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 PSG11Q9UQ72 335 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 RCL1Q9Y2P8 373 aaKnown RBP5.67□□□□□ -1.5
MSH2-204ENST00000461394 TMED3Q9Y3Q3 217 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 U3KQ87 197 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 HCFC1P51610 2035 aa5.67□□□□□ -1.5
MSH2-204ENST00000461394 FRYQ5TBA9 3013 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 IGHV1-69-2A0A0G2JMI3 117 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 A0A1B0GW55 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUXBA0A1W2PPF3 345 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 TMEM178BH3BS89 294 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 K7EPK0 472 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 SHOXO15266 292 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 TMPRSS2O15393 492 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 ST8SIA5O15466 376 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 ST8SIA3O43173 380 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 KCNAB3O43448 404 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 NDUFB3O43676 98 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 ZG16O60844 167 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 B3GALNT1O75752 331 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 NXPH3O95157 252 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 IGHV3-7P01780 117 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 HEXAP06865 529 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L2P0CJ85 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L3P0CJ86 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L4P0CJ87 422 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L5P0CJ88 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L6P0CJ89 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L7P0CJ90 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 PVALBP20472 110 aaPredicted RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 F2RP25116 425 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 ZNF345Q14585 488 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 CDSNQ15517 529 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 EFNB3Q15768 340 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 Q3ZCU0 254 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 LRRC10Q5BKY1 277 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 OR2B11Q5JQS5 317 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 TEX36Q5VZQ5 186 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4L9Q6RFH8 374 aaPredicted RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 ALKAL2Q6UX46 152 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 SLC51BQ86UW2 128 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 TGIF2LYQ8IUE0 185 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 FAM71E2Q8N5Q1 922 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DRAM1Q8N682 238 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 LRTM2Q8N967 370 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 ZBTB34Q8NCN2 500 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 LHFPL5Q8TAF8 219 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 FAM222BQ8WU58 562 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 EDARADDQ8WWZ3 215 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 RBPMSQ93062 196 aaKnown RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 MSI2Q96DH6 328 aaKnown RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 RRNAD1Q96FB5 475 aaKnown RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 SDSLQ96GA7 329 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 C1orf159Q96HA4 380 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 FAM234AQ9H0X4 552 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 SEBOXQ9HB31 216 aaPredicted RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 DCAF16Q9NXF7 216 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 DUX4Q9UBX2 424 aa5.66□□□□□ -1.5
MSH2-204ENST00000461394 SLC25A10Q9UBX3 287 aaPredicted RBP5.66□□□□□ -1.5
MSH2-204ENST00000461394 ELOA3CA0A087WX78 387 aaPredicted RBP5.65□□□□□ -1.5
MSH2-204ENST00000461394 hADV38S2A0JD32 116 aa5.65□□□□□ -1.5
MSH2-204ENST00000461394 B8ZZF3 427 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms