RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TAF9Q16594 264 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 C4orf26Q17RF5 130 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 HES3Q5TGS1 186 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 BRD3OSQ6XYD6 125 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 TMEM75Q8N9X5 138 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 OR51H1Q8NH63 302 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 TLCD1Q96CP7 247 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 ABHD14BQ96IU4 210 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 OR8B2Q96RD0 313 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 PKMYT1Q99640 499 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 TIPINQ9BVW5 301 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 NSRP1Q9H0G5 558 aaKnown RBP1.64□□□□□ -2.15
VCL-203ENST00000461383 PLEKHJ1Q9NW61 149 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 MRPL16Q9NX20 251 aaKnown RBP1.64□□□□□ -2.15
VCL-203ENST00000461383 USE1Q9NZ43 259 aa1.64□□□□□ -2.15
VCL-203ENST00000461383 OTOFQ9HC10 1997 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 IGKV1D-37A0A075B6S9 117 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 IGKV1-12A0A0C4DH73 117 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 LINC00862A6NCI5 91 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 A8MWP6 167 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 LECT2O14960 151 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 PFDN6O15212 129 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 BIRC5O15392 142 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 COCHO43405 550 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 DEXIO95424 95 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 CDS2O95674 445 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 IGKV1D-12P01611 117 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 OPN1SWP03999 348 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 CTSGP08311 255 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 OR13C7P0DN81 318 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 OR1E2P47887 323 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 BLVRAP53004 296 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 SLC35A2P78381 396 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 SPATA31B1PQ5VZV4 182 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 TMPPEQ6ZT21 453 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 ATP5L2Q7Z4Y8 100 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 MSRB3Q8IXL7 192 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 RIBC1Q8N443 379 aaPredicted RBP1.63□□□□□ -2.15
VCL-203ENST00000461383 YIPF7Q8N8F6 280 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 LY6G5BQ8NDX9 201 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 CCDC112Q8NEF3 446 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 MUC7Q8TAX7 377 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 SMIM19Q96E16 107 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 ARL5BQ96KC2 179 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 PACRGQ96M98 296 aaPredicted RBP1.63□□□□□ -2.15
VCL-203ENST00000461383 KCTD7Q96MP8 289 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 DHRS9Q9BPW9 319 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 SLC22A4Q9H015 551 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 FGFR1OP2Q9NVK5 253 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 TAS2R9Q9NYW1 312 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 TP53TG1Q9Y2A0 90 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 CARHSP1Q9Y2V2 147 aaKnown RBP1.63□□□□□ -2.15
VCL-203ENST00000461383 LINC00588Q9Y4M8 146 aa1.63□□□□□ -2.15
VCL-203ENST00000461383 MYO9BQ13459 2157 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 A0A1B0GU33 70 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 TINCRA0A1B0GVN0 87 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 F5H768 121 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 AZIN1O14977 448 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 CRTAPO75718 401 aaPredicted RBP1.62□□□□□ -2.15
VCL-203ENST00000461383 KRT7P08729 469 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 P0C880 135 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 NQO1P15559 274 aaKnown RBP1.62□□□□□ -2.15
VCL-203ENST00000461383 CD79BP40259 229 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 MAGEA2P43356 314 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 EMP2P54851 167 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 KRTAP10-10P60014 251 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 HPCAP84074 193 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 PDGFRLQ15198 375 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 OR8G1Q15617 311 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 MESTQ5EB52 335 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 Q6ZRU5 148 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 CCDC121Q6ZUS5 278 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 LYPD6Q86Y78 171 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 Q8NAQ8 132 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 OR8K1Q8NGG5 319 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 OR10D3Q8NH80 312 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 GPR119Q8TDV5 335 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 LMX1AQ8TE12 382 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.62□□□□□ -2.151e-10■■■■■ 87.1
VCL-203ENST00000461383 ACY3Q96HD9 319 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 OR7D2Q96RA2 312 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 MED28Q9H204 178 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 MS4A6AQ9H2W1 248 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 LRRC19Q9H756 370 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 VPREB3Q9UKI3 123 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 NOSIPQ9Y314 301 aaKnown RBP1.62□□□□□ -2.15
VCL-203ENST00000461383 HDGFL3Q9Y3E1 203 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 POLR3HQ9Y535 204 aaPredicted RBP1.62□□□□□ -2.15
VCL-203ENST00000461383 MTCH2Q9Y6C9 303 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 RIMS2Q9UQ26 1411 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 NAV1Q8NEY1 1877 aa1.62□□□□□ -2.15
VCL-203ENST00000461383 NLRC5Q86WI3 1866 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 NACADO15069 1562 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 CEP170Q5SW79 1584 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 TRAV8-1A0A0A6YYK1 113 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 TEX50A0A1B0GTY4 177 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 IGSF23A1L1A6 192 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 E7EQL1 145 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 SLC16A4O15374 487 aa1.61□□□□□ -2.15
VCL-203ENST00000461383 DEDDO75618 318 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms