RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 WNT4P56705 351 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 KLF3P57682 345 aaPredicted RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 OR12D2P58182 307 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 UBE2NP61088 152 aaKnown RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SLC35A2P78381 396 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 FAM3AP98173 230 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 HNRNPA0Q13151 305 aaKnown RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 KLF9Q13886 244 aaPredicted RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 GSG1Q2KHT4 349 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 RSPO1Q2MKA7 263 aaPredicted RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SMIM21Q3B7S5 101 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SLC25A30Q5SVS4 291 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 FAM27BQ5VT28 67 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 ADAM5Q6NVV9 412 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF322Q6U7Q0 402 aaPredicted RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SNX29P2Q8IUI4 249 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 C1orf87Q8N0U7 546 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 NRACQ8N912 160 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 OTOSQ8NHW6 89 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SSC4DQ8WTU2 575 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SPRYD4Q8WW59 207 aaPredicted RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 NEUROG1Q92886 237 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 RNASE6Q93091 150 aaKnown RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 C12orf43Q96C57 262 aaKnown RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SLAMF6Q96DU3 332 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 NARS2Q96I59 477 aaKnown RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF649Q9BS31 505 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 ATG101Q9BSB4 218 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 OR2H1Q9GZK4 316 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SIRPDQ9H106 197 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 DCSTAMPQ9H295 470 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 TMPRSS5Q9H3S3 457 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 RHOFQ9HBH0 211 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 Q9N2K0 584 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 NOX4Q9NPH5 578 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 KCNJ16Q9NPI9 418 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 PLEKHJ1Q9NW61 149 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 MED9Q9NWA0 146 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 MCUBQ9NWR8 336 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 UBQLN2Q9UHD9 624 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 GNG8Q9UK08 70 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 IKZF2Q9UKS7 526 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 FZR1Q9UM11 496 aa4.15□□□□□ -1.75
SF3A3-202ENST00000460925 RPL36Q9Y3U8 105 aaKnown RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 RAI1Q7Z5J4 1906 aaPredicted RBP4.15□□□□□ -1.75
SF3A3-202ENST00000460925 SPTAN1Q13813 2472 aaKnown RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 DOPEY1Q5JWR5 2465 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 ANKHD1Q8IWZ3 2542 aaKnown RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 PPIAL4EA0A075B759 164 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 PPIAL4CA0A0B4J2A2 164 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 IGHV2OR16-5A0A0B4J2B6 119 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 hCG_38984A0A1B0GV85 526 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 A0A1W2PPR1 153 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 C5orf49A4QMS7 147 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 OR6C6A6NF89 314 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 FAM74A7A6NL05 159 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 KRBOX1C9JBD0 128 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF878C9JN71 531 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 PPIAL4DF5H284 164 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 F5H5K5 113 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 M0R135 149 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 GOSR2O14653 212 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 PPIHO43447 177 aaKnown RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 TCF21O43680 179 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 LMX1BO60663 402 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 H2BFMP0C1H6 154 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 PPIAL4FP0DN26 164 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 PIPP12273 146 aaPredicted RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 FOLR2P14207 255 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF14P17017 642 aaPredicted RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 ALOX5APP20292 161 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 GNRHRP30968 328 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 GABRA5P31644 462 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 OPRL1P41146 370 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 AKR1C3P42330 323 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 GUCA1AP43080 201 aaPredicted RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 CX3CR1P49238 355 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 CNN1P51911 297 aaKnown RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 ZNF121P58317 390 aaPredicted RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 HIST1H3AP68431 136 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 TGFBR3Q03167 851 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 TLE4Q04727 773 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 BSPH1Q075Z2 132 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 RAB40BQ12829 278 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 RAB31Q13636 194 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 INSL4Q14641 139 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 P2RY6Q15077 328 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 RAB35Q15286 201 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 VAMP3Q15836 100 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 NEDD8Q15843 81 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 TNXAQ16473 311 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 SNAI3Q3KNW1 292 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 FBXL19-AS1Q494R0 122 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 SLC22A6Q4U2R8 563 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 FAM74A3Q4VXF1 159 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 DMRTC1Q5HYR2 192 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 TMEM255AQ5JRV8 349 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 ELFN2Q5R3F8 820 aa4.14□□□□□ -1.75
SF3A3-202ENST00000460925 RBM48Q5RL73 367 aaKnown RBP4.14□□□□□ -1.75
SF3A3-202ENST00000460925 TIMM23BQ5SRD1 257 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms