RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 CLDN34H7C241 214 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 TRIM77I1YAP6 450 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 ZNF701M0R085 212 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 FCER2P06734 321 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 MNDAP41218 407 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 KIR2DS4P43632 304 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 KIR2DS1Q14954 304 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 LY6EQ16553 131 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 SRSF7Q16629 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 LY6G6FQ5SQ64 297 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 STEAP3Q658P3 488 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 TMEM86BQ8N661 226 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 OR10X1Q8NGY0 326 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 ABHD14AQ9BUJ0 271 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 MRPS7Q9Y2R9 242 aaKnown RBP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 AMMECR1Q9Y4X0 333 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-229ENST00000460826 POMT1Q9Y6A1 747 aa11.28□□□□□ -0.6
HDLBP-229ENST00000460826 STAB1Q9NY15 2570 aa11.27□□□□□ -0.6
HDLBP-229ENST00000460826 TRBV6-7A0A0A0MS04 114 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 VGLL3A8MV65 326 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 BET1O15155 118 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 ST8SIA5O15466 376 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 RGS5O15539 181 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 RGS11O94810 467 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 CEACAM3P40198 252 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 CEACAM6P40199 344 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 REG1BP48304 166 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 AANATQ16613 207 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 FBLN7Q53RD9 439 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 HOGA1Q86XE5 327 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 SNX29P2Q8IUI4 249 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 ODF3L1Q8IXM7 274 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 ST6GALNAC6Q969X2 333 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 RPEQ96AT9 228 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 CREB3L1Q96BA8 519 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 C6orf62Q9GZU0 229 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-229ENST00000460826 NXF2Q9GZY0 626 aaKnown RBP11.27□□□□□ -0.61
HDLBP-229ENST00000460826 C11orf54Q9H0W9 315 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-229ENST00000460826 DPAGT1Q9H3H5 408 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 EXTL2Q9UBQ6 330 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 TENM1Q9UKZ4 2725 aa11.27□□□□□ -0.61
HDLBP-229ENST00000460826 HSD17B6O14756 317 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 HSPA12AO43301 675 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 ZBTB25P24278 435 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 CD24P25063 80 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 C16orf87Q6PH81 154 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 CNIH2Q6PI25 160 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 CCBE1Q6UXH8 406 aaPredicted RBP11.26□□□□□ -0.61
HDLBP-229ENST00000460826 LYG1Q8N1E2 194 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 BEST4Q8NFU0 473 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 OR2AK2Q8NG84 335 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 OR5R1Q8NH85 324 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 MCFD2Q8NI22 146 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 IFI27L2Q9H2X8 130 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 RDH8Q9NYR8 311 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 VPREB3Q9UKI3 123 aa11.26□□□□□ -0.61
HDLBP-229ENST00000460826 FAM181BA6NEQ2 426 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 OOSP1A8MZH6 123 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 TIMM23O14925 209 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 GPR137BO60478 399 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 PRSS3P35030 304 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 OR3A3P47888 321 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 DYNLT3P51808 116 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ZNF137PP52743 207 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ZNF816Q0VGE8 651 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-229ENST00000460826 KRTAP21-3Q3LHN1 58 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 FAM216AQ8WUB2 273 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ZFAND2BQ8WV99 257 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 CFHR4Q92496 578 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 SNAPC3Q92966 411 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 DGCR14Q96DF8 476 aaKnown RBP11.25□□□□□ -0.61
HDLBP-229ENST00000460826 RBMXL1Q96E39 390 aaKnown RBP11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ABHD14BQ96IU4 210 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 MDFIQ99750 246 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 AGMATQ9BSE5 352 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ABCB10Q9NRK6 738 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ANXA10Q9UJ72 324 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 ANAPC10Q9UM13 185 aa11.25□□□□□ -0.61
HDLBP-229ENST00000460826 SAA2-SAA4A0A096LPE2 208 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 IGHV1-3A0A0C4DH29 117 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 A6NDX4 124 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 BTBD17A6NE02 478 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 ITGB1BP1O14713 200 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 DIRAS3O95661 229 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 GAPDHP04406 335 aaKnown RBP11.24□□□□□ -0.61
HDLBP-229ENST00000460826 SAA2P0DJI9 122 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-229ENST00000460826 IL3RAP26951 378 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 CBX5P45973 191 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 RAB7AP51149 207 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 RNASE12Q5GAN4 147 aaKnown RBP11.24□□□□□ -0.61
HDLBP-229ENST00000460826 TMEM219Q86XT9 240 aa11.24□□□□□ -0.61
HDLBP-229ENST00000460826 H1FOOQ8IZA3 346 aaPredicted RBP11.24□□□□□ -0.61
HDLBP-229ENST00000460826 DRAM1Q8N682 238 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms