RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 ZNF782Q6ZMW2 699 aaPredicted RBP13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 ZNF497Q6ZNH5 498 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 OR4K15Q8NH41 348 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 CCDC107Q8WV48 283 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 S100A16Q96FQ6 103 aaKnown RBP13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 ZNF714Q96N38 554 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 CHMP1AQ9HD42 196 aaPredicted RBP13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 DIABLOQ9NR28 239 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 AK3Q9UIJ7 227 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 TRAPPC2LQ9UL33 140 aa13.21□□□□□ -0.29
TMEM50B-205ENST00000459909 TRAV39A0A0B4J263 110 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 ODF3BA8MYP8 253 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 FAM25AB3EWG3 89 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 FAM25CB3EWG5 89 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 FAM25GB3EWG6 89 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 CA11O75493 328 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 MT-ND4P03905 459 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 ZNF728P0DKX0 622 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 HIST1H1DP16402 221 aaKnown RBP13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 MRPS15P82914 257 aaKnown RBP13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 PAX5Q02548 391 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 ETV3LQ6ZN32 361 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 TCF23Q7RTU1 214 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 ZNF565Q8N9K5 539 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 SETD6Q8TBK2 473 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 MRGPRDQ8TDS7 321 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 ASCL2Q99929 193 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 CMSS1Q9BQ75 279 aaKnown RBP13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 C6orf62Q9GZU0 229 aaPredicted RBP13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 ABCG5Q9H222 651 aa13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 UBE2J1Q9Y385 318 aaPredicted RBP13.2□□□□□ -0.3
TMEM50B-205ENST00000459909 TRAV18A0A075B6X5 111 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 MFNGO00587 321 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 APOA1P02647 267 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 EIF4EP06730 217 aaKnown RBP13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 CD3GP09693 182 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 LYL1P12980 280 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 CDK2P24941 298 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 THBS3P49746 956 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 ARFRP1Q13795 201 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 ARL6IP1Q15041 203 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 CDNFQ49AH0 187 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 LDLRAD2Q5SZI1 272 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 ZNF626Q68DY1 528 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 IZUMO1Q8IYV9 350 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 OR13A1Q8NGR1 328 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 OR13D1Q8NGV5 346 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 MCFD2Q8NI22 146 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 HDHD3Q9BSH5 251 aaPredicted RBP13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 SLIRPQ9GZT3 109 aaKnown RBP13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 GAL3ST2Q9H3Q3 398 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 NCOR1P1Q9H4R4 102 aa13.19□□□□□ -0.3
TMEM50B-205ENST00000459909 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 A6NJ64 397 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 SERPINE3A8MV23 424 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 TMEM69Q5SWH9 247 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 C16orf82Q7Z2V1 217 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 OR11H6Q8NGC7 330 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 CORO2AQ92828 525 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 AKR1E2Q96JD6 320 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 CMTM3Q96MX0 182 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 PALMDQ9NP74 551 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 C12orf4Q9NQ89 552 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 BATF3Q9NR55 127 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 TAS2R3Q9NYW6 316 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
TMEM50B-205ENST00000459909 TMEM235A6NFC5 223 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 A6NHS1 94 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 ZNF729A6NN14 1252 aaPredicted RBP13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 C17orf98A8MV24 154 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 GSTP1P09211 210 aaKnown RBP13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 ELK1P19419 428 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 TALDO1P37837 337 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 MNDAP41218 407 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 DLX6P56179 175 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 C6orf183Q5T699 404 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 C10orf99Q6UWK7 81 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 MRPL30Q8TCC3 161 aaKnown RBP13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 RIMS4Q9H426 269 aaPredicted RBP13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 CALYQ9NYX4 217 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 KCNIP1Q9NZI2 227 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 ADAM30Q9UKF2 790 aa13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 ELF5Q9UKW6 265 aaPredicted RBP13.17□□□□□ -0.3
TMEM50B-205ENST00000459909 KBTBD11-OT1A0A1B0GTJ5 212 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 CTDSP2O14595 271 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 XRCC3O43542 346 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 NAPSAO96009 420 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 LPLP06858 475 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 RCC1P18754 421 aaPredicted RBP13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 GZMHP20718 246 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 SSTR5P35346 364 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 TAS2R20P59543 309 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 GNG2P59768 71 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 MADCAM1Q13477 382 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 LTC4SQ16873 150 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 ZNF260Q3ZCT1 412 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 PRAMEF5Q5TYX0 476 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 TRAT1Q6PIZ9 186 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 LAX1Q8IWV1 398 aa13.16□□□□□ -0.3
TMEM50B-205ENST00000459909 GAPTQ8N292 157 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms