RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 FGF20Q9NP95 211 aaPredicted RBP14.39□□□□□ -0.11
MSH6-206ENST00000455383 C19orf73Q9NVV2 129 aa14.39□□□□□ -0.11
MSH6-206ENST00000455383 JPT1Q9UK76 154 aa14.39□□□□□ -0.11
MSH6-206ENST00000455383 OGG1O15527 345 aa14.38□□□□□ -0.11
MSH6-206ENST00000455383 ZNF660Q6AZW8 331 aaPredicted RBP14.38□□□□□ -0.11
MSH6-206ENST00000455383 RAB12Q6IQ22 244 aa14.38□□□□□ -0.11
MSH6-206ENST00000455383 RPL36Q9Y3U8 105 aaKnown RBP14.38□□□□□ -0.11
MSH6-206ENST00000455383 TRBV5-5A0A0J9YX44 114 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 A0A1W2PN81 502 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 FAM90A7PA6NKC0 464 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 FAM90A23PA8MXZ1 464 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 GLAP06280 429 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 IGHV4-30-4P0DP06 118 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 EGR2P11161 476 aaPredicted RBP14.37□□□□□ -0.11
MSH6-206ENST00000455383 CHRNA7P36544 502 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 VEGFCP49767 419 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 RASSF2P50749 326 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 HTD2P86397 168 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 LYPD6Q86Y78 171 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 TCTEX1D1Q8N7M0 179 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 OR52L2PQ8NGH6 319 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 APH1BQ8WW43 257 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 PYDC1Q8WXC3 89 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 CYYR1Q96J86 154 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 FOXA2Q9Y261 457 aaPredicted RBP14.37□□□□□ -0.11
MSH6-206ENST00000455383 NUBP2Q9Y5Y2 271 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 PEX16Q9Y5Y5 336 aa14.37□□□□□ -0.11
MSH6-206ENST00000455383 H3BNX3 289 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 YPEL1O60688 119 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 HSPB1P04792 205 aaKnown RBP14.36□□□□□ -0.11
MSH6-206ENST00000455383 PPP1CCP36873 323 aaKnown RBP14.36□□□□□ -0.11
MSH6-206ENST00000455383 SRSF7Q16629 238 aaKnown RBP eCLIP14.36□□□□□ -0.11
MSH6-206ENST00000455383 ECSCRQ19T08 205 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 SIGIRRQ6IA17 410 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 CD200R1LQ6Q8B3 271 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 C5orf24Q7Z6I8 188 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 CBR4Q8N4T8 237 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 OR13C5Q8NGS8 318 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 ISOC1Q96CN7 298 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 SMIM19Q96E16 107 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 RDH12Q96NR8 316 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 YPEL2Q96QA6 119 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 ERGIC3Q9Y282 383 aa14.36□□□□□ -0.11
MSH6-206ENST00000455383 TRAV8-7A0A075B6U6 113 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 HSPA12AO43301 675 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 OR3A3P47888 321 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 ETV1P50549 477 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 RPS11P62280 158 aaKnown RBP eCLIP14.35□□□□□ -0.11
MSH6-206ENST00000455383 CX3CL1P78423 397 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 PITPNAQ00169 270 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 OR2G6Q5TZ20 316 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 GLIPR1L1Q6UWM5 242 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 MRPL30Q8TCC3 161 aaKnown RBP14.35□□□□□ -0.11
MSH6-206ENST00000455383 CASTOR1Q8WTX7 329 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 MUL1Q969V5 352 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 FLYWCH2Q96CP2 140 aaKnown RBP14.35□□□□□ -0.11
MSH6-206ENST00000455383 OR4C12Q96R67 309 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 KIAA1456Q9P272 454 aa14.35□□□□□ -0.11
MSH6-206ENST00000455383 SAA2-SAA4A0A096LPE2 208 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 ARPC1BO15143 372 aaKnown RBP14.34□□□□□ -0.11
MSH6-206ENST00000455383 ATP5HO75947 161 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 IGLV1-51P01701 117 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 SAA2P0DJI9 122 aaPredicted RBP14.34□□□□□ -0.11
MSH6-206ENST00000455383 FSTP19883 344 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 FUT3P21217 361 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 LRRC36Q1X8D7 754 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 C6orf141Q5SZD1 244 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 PYHIN1Q6K0P9 492 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 FAM71F2Q6NXP2 309 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 CDH26Q8IXH8 852 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 RHOVQ96L33 236 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 Q96M66 194 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 IFI27L2Q9H2X8 130 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 BANF2Q9H503 90 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 BABAM2Q9NXR7 383 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 KCNIP1Q9NZI2 227 aa14.34□□□□□ -0.11
MSH6-206ENST00000455383 LOC100130705A0A1B0GUX0 176 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 FCN1O00602 326 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 RRHO14718 337 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 LALBAP00709 142 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 Q499Y3 187 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 DMKNQ6E0U4 476 aaPredicted RBP14.33□□□□□ -0.12
MSH6-206ENST00000455383 TMPRSS11AQ6ZMR5 421 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 GHSRQ92847 366 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 OR14A2Q96R54 314 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 FBXL15Q9H469 300 aa14.33□□□□□ -0.12
MSH6-206ENST00000455383 TRBV5-7A0A0A0MS05 114 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 UBE2QL1A1L167 161 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 WBP4O75554 376 aaKnown RBP14.32□□□□□ -0.12
MSH6-206ENST00000455383 CIB2O75838 187 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 RGS11O94810 467 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 MAS1P04201 325 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 MGMTP16455 207 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 DCKP27707 260 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 TMEM267Q0VDI3 215 aaPredicted RBP14.32□□□□□ -0.12
MSH6-206ENST00000455383 HMGN3Q15651 99 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 AKIRIN2Q53H80 203 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 YIF1BQ5BJH7 314 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 FAM131AQ6UXB0 335 aa14.32□□□□□ -0.12
MSH6-206ENST00000455383 ADAMTSL5Q6ZMM2 481 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms