RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 CBY1Q9Y3M2 126 aa8.26□□□□□ -1.09
CCDC171-203ENST00000449575 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCDC171-203ENST00000449575 TRAV8-7A0A075B6U6 113 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 TAAR5O14804 337 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 PTBP3O95758 552 aaKnown RBP8.25□□□□□ -1.09
CCDC171-203ENST00000449575 CYB5AP00167 134 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 IFNA2P01563 188 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 FCGR3AP08637 254 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 HKR1P10072 659 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 ZNF20P17024 532 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 EGR1P18146 543 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 ZBTB25P24278 435 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 CD80P33681 288 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 GATA4P43694 442 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 GUCA2AQ02747 115 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 DHRS11Q6UWP2 260 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 TMEM106BQ9NUM4 274 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 C1orf123Q9NWV4 160 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 A0A096LNT2 108 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 A0A1W2PPH5 198 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 VWC2LB2RUY7 222 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 SEC14L6B5MCN3 397 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 RNF223E7ERA6 249 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 CCSO14618 274 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 SYNGR1O43759 233 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 SNRNP70P08621 437 aaKnown RBP8.25□□□□□ -1.09
CCDC171-203ENST00000449575 TNFRSF1AP19438 455 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 RAB4AP20338 218 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 DDTP30046 118 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 AWAT1Q58HT5 328 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 WDR82Q6UXN9 313 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 BPIFB2Q8N4F0 458 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 AKR1E2Q96JD6 320 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 ZNF488Q96MN9 340 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 RTL8AQ9BWD3 113 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 OR51I2Q9H344 312 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 CHODLQ9H9P2 273 aa8.25□□□□□ -1.09
CCDC171-203ENST00000449575 IGHV4-61A0A0C4DH41 118 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 LRP5LA4QPB2 252 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 BTBD17A6NE02 478 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 ZNF736B4DX44 427 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-203ENST00000449575 MED6O75586 246 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 TFF1P04155 84 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 NDUFB7P17568 137 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 ADRA2CP18825 462 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 IL2RGP31785 369 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 PCP4P48539 62 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 PDLIM4P50479 330 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 IL13RA1P78552 427 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 KIAA0141Q14154 515 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-203ENST00000449575 WDR73Q6P4I2 378 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 PRSS57Q6UWY2 283 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 BTNL8Q6UX41 500 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 GCSAMQ8N6F7 178 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 OR5A2Q8NGI9 324 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 OR5D18Q8NGL1 313 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 NEU1Q99519 415 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 SLC2A8Q9NY64 477 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 WIPI2Q9Y4P8 454 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 ZFHX3Q15911 3703 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 TRBV5-7A0A0A0MS05 114 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-203ENST00000449575 C5orf51A6NDU8 294 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 TMEM178BH3BS89 294 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.24□□□□□ -1.09
CCDC171-203ENST00000449575 M0R036 132 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 MPZP25189 248 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 SULT1A2P50226 295 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 GNG3P63215 75 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 ZNF529Q6P280 563 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 PP6455Q8WZ26 134 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 PRDM13Q9H4Q3 707 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 FN3KRPQ9HA64 309 aa8.24□□□□□ -1.09
CCDC171-203ENST00000449575 SONP18583 2426 aaKnown RBP8.23□□□□□ -1.09
CCDC171-203ENST00000449575 ELOA3CA0A087WX78 387 aaPredicted RBP8.23□□□□□ -1.09
CCDC171-203ENST00000449575 A0A087X0M5 115 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 A0A0A6YYH2 397 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 A0A1B0GX30 115 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 hCG_1809904A0A1W2PP81 198 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 A0A1W2PR64 198 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 A0A1W2PRV1 198 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 MEIS3P1A6NDR6 274 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 A6NJ64 397 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 FAM157AC9JC47 383 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 TCAPO15273 167 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 DUS4LO95620 317 aaKnown RBP8.23□□□□□ -1.09
CCDC171-203ENST00000449575 ZNF735P0CB33 412 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 PET100P0DJ07 73 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 TAS2R31P59538 309 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 OR2B8PP59922 312 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 MRPS11P82912 194 aaKnown RBP8.23□□□□□ -1.09
CCDC171-203ENST00000449575 RAB11BQ15907 218 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 SCGB2B2Q4G0G5 96 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 DEFB108BQ8NET1 73 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 OR52N4Q8NGI2 321 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 LRRC29Q8WV35 223 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 MAFIPQ8WZ33 124 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 C10orf35Q96D05 121 aa8.23□□□□□ -1.09
CCDC171-203ENST00000449575 DNAJB11Q9UBS4 358 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms