RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PLA1AQ53H76 456 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 CIARTQ8N365 385 aaPredicted RBP11.98□□□□□ -0.49
TNF-208ENST00000449264 KIR3DL3Q8N743 410 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 OR52M1Q8NGK5 317 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 MARCH1Q8TCQ1 289 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 CREB3L1Q96BA8 519 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 PCGF1Q9BSM1 259 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 MMP28Q9H239 520 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 KCNS2Q9ULS6 477 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 INSIG2Q9Y5U4 225 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 SVEP1Q4LDE5 3571 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 TLN2Q9Y4G6 2542 aa11.98□□□□□ -0.49
TNF-208ENST00000449264 SLC31A2O15432 143 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 YPEL1O60688 119 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 NDUFB6O95139 128 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 TCRBP04435 133 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 OR8U9P0C7N5 309 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 LUMP51884 338 aaPredicted RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 DCAF12L2Q5VW00 463 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 VMO1Q7Z5L0 202 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 OR8U1Q8NH10 309 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 EDARADDQ8WWZ3 215 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 MSI2Q96DH6 328 aaKnown RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 YPEL2Q96QA6 119 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 ABHD14AQ9BUJ0 271 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 C20orf85Q9H1P6 137 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 TMEM133Q9H2Q1 129 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 NUDT15Q9NV35 164 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 HIF1ANQ9NWT6 349 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 PSG11Q9UQ72 335 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 ACANP16112 2415 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 ARPC1BO15143 372 aaKnown RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 TOX4O94842 621 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 RLN1P04808 185 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 IGHV4-31P0DP07 118 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 ZNF16P17020 682 aaPredicted RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 PI3P19957 117 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 KLRD1Q13241 179 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 PLET1Q6UQ28 207 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 CCBE1Q6UXH8 406 aaPredicted RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 LDLRAD3Q86YD5 345 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 PDZD9Q8IXQ8 264 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 TMEM186Q96B77 213 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 UPRTQ96BW1 309 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 C1orf159Q96HA4 380 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 SLC25A21Q9BQT8 299 aaPredicted RBP11.97□□□□□ -0.49
TNF-208ENST00000449264 SLC5A7Q9GZV3 580 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 OR2D2Q9H210 308 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 ZNRD1Q9P1U0 126 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 COPZ2Q9P299 210 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 RNF150Q9ULK6 438 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 FLVCR2Q9UPI3 526 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 VSIG4Q9Y279 399 aa11.97□□□□□ -0.49
TNF-208ENST00000449264 CELSR1Q9NYQ6 3014 aa11.96□□□□□ -0.49
TNF-208ENST00000449264 CSPG4Q6UVK1 2322 aa11.96□□□□□ -0.49
TNF-208ENST00000449264 TRAV20A0A0B4J274 112 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 HSD17B6O14756 317 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 TGFAP01135 160 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 ZNF134P52741 427 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 RAB25P57735 213 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 OXA1LQ15070 435 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 TMED4Q7Z7H5 227 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 CENPSQ8N2Z9 138 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 PNKDQ8N490 385 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 DMRTB1Q96MA1 342 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 TOLLIPQ9H0E2 274 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 NUBP2Q9Y5Y2 271 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 OTOGQ6ZRI0 2925 aa11.96□□□□□ -0.5
TNF-208ENST00000449264 TEX15Q9BXT5 2789 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 IGHV2-26A0A0B4J1V2 119 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 PRTN3P24158 256 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 GZMKP49863 264 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 CT45A1Q5HYN5 189 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 ABHD12Q8N2K0 398 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 ZNF439Q8NDP4 499 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 DUSP18Q8NEJ0 188 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 CT45A3Q8NHU0 189 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 CHPT1Q8WUD6 406 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 CCL28Q9NRJ3 127 aa11.95□□□□□ -0.5
TNF-208ENST00000449264 A0A087X0M5 115 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 A0A1B0GX30 115 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 TOR1AO14656 332 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 MMP9P14780 707 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 ECI1P42126 302 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 PAX8Q06710 450 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 PHLDA2Q53GA4 152 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 FAHD2BQ6P2I3 314 aaPredicted RBP11.94□□□□□ -0.5
TNF-208ENST00000449264 ZNF818PQ6ZRF7 136 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 SLC38A6Q8IZM9 456 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 LYG1Q8N1E2 194 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 OR13D1Q8NGV5 346 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 FAHD2AQ96GK7 314 aa11.94□□□□□ -0.5
TNF-208ENST00000449264 TBX15Q96SF7 602 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms