RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 MGAT4AQ9UM21 535 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 SIGLEC9Q9Y336 463 aa11.67□□□□□ -0.54
USP39-206ENST00000448971 GAPDHP04406 335 aaKnown RBP11.66□□□□□ -0.54
USP39-206ENST00000448971 FAM106CPP0CH98 169 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 SNRPBP14678 240 aaKnown RBP11.66□□□□□ -0.54
USP39-206ENST00000448971 HIST1H1DP16402 221 aaKnown RBP11.66□□□□□ -0.54
USP39-206ENST00000448971 HTD2P86397 168 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 ZNF816Q0VGE8 651 aaPredicted RBP11.66□□□□□ -0.54
USP39-206ENST00000448971 PLAC9Q5JTB6 97 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 C5orf24Q7Z6I8 188 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 MOB3BQ86TA1 216 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 LYG1Q8N1E2 194 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 ZNF439Q8NDP4 499 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 PTX4Q96A99 478 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 PRSS22Q9GZN4 317 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 ZNF702PQ9H963 129 aa11.66□□□□□ -0.54
USP39-206ENST00000448971 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 MFNGO00587 321 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 TXNL1O43396 289 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 PEX14O75381 377 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 OR2F2O95006 317 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 GNB3P16520 340 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 TMEM11P17152 192 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 KIR2DS4P43632 304 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 LSM3P62310 102 aaKnown RBP11.65□□□□□ -0.54
USP39-206ENST00000448971 ARFRP1Q13795 201 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 HABP2Q14520 560 aaPredicted RBP11.65□□□□□ -0.54
USP39-206ENST00000448971 MORN2Q502X0 79 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 FBLN7Q53RD9 439 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 IDNKQ5T6J7 187 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 STEAP3Q658P3 488 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 ZNF880Q6PDB4 577 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 Q6ZPA2 131 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 TGIF2LXQ8IUE1 241 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 OR2AK2Q8NG84 335 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 CFHR4Q92496 578 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 YIPF6Q96EC8 236 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 SLC23A1Q9UHI7 598 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 MOB4Q9Y3A3 225 aa11.65□□□□□ -0.54
USP39-206ENST00000448971 IGHV3-72A0A0B4J1Y9 119 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 SERPINE3A8MV23 424 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 RAB27BO00194 218 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 HSPA12AO43301 675 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 YPEL1O60688 119 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 SCGNO76038 276 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 TSPAN15O95858 294 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 IGKV1D-33P01593 117 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 IGKV1-33P01594 117 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 VSIG10L2P0DP72 767 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 TGFBR1P36897 503 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 ARL6IP1Q15041 203 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 CT45A1Q5HYN5 189 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 HIST2H2BDQ6DRA6 164 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 C11orf88Q6PI97 169 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 KLHDC1Q8N7A1 406 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 CT45A3Q8NHU0 189 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 RTN4IP1Q8WWV3 396 aaPredicted RBP11.64□□□□□ -0.55
USP39-206ENST00000448971 PHF21AQ96BD5 680 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 RBM14Q96PK6 669 aaKnown RBP11.64□□□□□ -0.55
USP39-206ENST00000448971 YPEL2Q96QA6 119 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 Q9N2K0 584 aa11.64□□□□□ -0.55
USP39-206ENST00000448971 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 A6NJY4 79 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 TRIM64CA6NLI5 447 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 FCGR3AP08637 254 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 SMIM18P0DKX4 95 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 TALDO1P37837 337 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 VDAC2P45880 294 aaPredicted RBP11.63□□□□□ -0.55
USP39-206ENST00000448971 ZNF134P52741 427 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 HNF4GQ14541 408 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 C9orf152Q5JTZ5 239 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 RHBDL2Q9NX52 303 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 KCNK7Q9Y2U2 307 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 ETV7Q9Y603 341 aa11.63□□□□□ -0.55
USP39-206ENST00000448971 M0QZK8 103 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 ST8SIA5O15466 376 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 SCTP09683 121 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 ZBTB25P24278 435 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 ZNF137PP52743 207 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 SCAND1P57086 179 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 BLCAPP62952 87 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 KIR2DS1Q14954 304 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 TMEM95Q3KNT9 176 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 ABCA11PQ4W5N1 156 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 THNSL2Q86YJ6 484 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 IZUMO1Q8IYV9 350 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
USP39-206ENST00000448971 MAFIPQ8WZ33 124 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 ST6GALNAC6Q969X2 333 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 FUNDC2Q9BWH2 189 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 IFI27L2Q9H2X8 130 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 OR1A1Q9P1Q5 309 aa11.62□□□□□ -0.55
USP39-206ENST00000448971 SAA2-SAA4A0A096LPE2 208 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 SH2D7A6NKC9 451 aaPredicted RBP11.61□□□□□ -0.55
USP39-206ENST00000448971 FAM90A9PA6NNJ1 464 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 TRDCB7Z8K6 153 aa11.61□□□□□ -0.55
USP39-206ENST00000448971 FABP7O15540 132 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms