RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PYHIN1Q6K0P9 492 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF880Q6PDB4 577 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 C11orf44Q8N8P7 122 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 OR1L1Q8NH94 360 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 RFESDQ8TAC1 157 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 GPX8Q8TED1 209 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 SDHCQ99643 169 aaPredicted RBP11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 ST6GALNAC5Q9BVH7 336 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 SRRQ9GZT4 340 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 PITPNC1Q9UKF7 332 aa11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 TBL2Q9Y4P3 447 aaKnown RBP11.07□□□□□ -0.64
PDLIM2-213ENST00000448520 TRGV10A0A0A0MS01 117 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 TRBV6-6A0A0A6YYG2 114 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 hADV38S2A0JD32 116 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 FUOMA2VDF0 154 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 FAM172BPA6NC97 362 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 C17orf98A8MV24 154 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 C12orf77C9JDV5 145 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 C15orf65H3BRN8 121 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 LANCL1O43813 399 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 CA11O75493 328 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 SCTP09683 121 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 CGB3P0DN86 165 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 CGB7P0DN87 165 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 MRPS15P82914 257 aaKnown RBP11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 MEF2CQ06413 473 aaPredicted RBP11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 ARL6IP1Q15041 203 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 PRAMEF5Q5TYX0 476 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 OR52W1Q6IF63 320 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 Q8N2B8 174 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 PRR18Q8N4B5 295 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 OR13D1Q8NGV5 346 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 TAF9BQ9HBM6 251 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 ABCB10Q9NRK6 738 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 MBNL3Q9NUK0 354 aaKnown RBP11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 CALYQ9NYX4 217 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 KLK11Q9UBX7 282 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 LINC00312Q9Y6C7 94 aa11.06□□□□□ -0.64
PDLIM2-213ENST00000448520 J3QRK9 145 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 CHST1O43916 411 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 FBXO24O75426 580 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 RBP4P02753 201 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 LPLP06858 475 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 GSTT2P0CG29 244 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 GSTT2BP0CG30 244 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF728P0DKX0 622 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 COX7A1P24310 79 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 HLA-DRB3P79483 266 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 LSAMPQ13449 338 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 HMGN3Q15651 99 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 SMIM4Q8WVI0 70 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 CORO2AQ92828 525 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 SNAPC3Q92966 411 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 ARL11Q969Q4 196 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF714Q96N38 554 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 OR4F4Q96R69 305 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 PRSS22Q9GZN4 317 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 NCOR1P1Q9H4R4 102 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 OR6C3Q9NZP0 311 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 TCF19Q9Y242 345 aa11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 UBE2J1Q9Y385 318 aaPredicted RBP11.05□□□□□ -0.64
PDLIM2-213ENST00000448520 IGHV3-43A0A0B4J1X8 118 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 IGKV1-6A0A0C4DH72 117 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF729A6NN14 1252 aaPredicted RBP11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 GABARAPH6UMI1 98 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 CTDSPLO15194 276 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 IGHV3-7P01780 117 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 HBZP02008 142 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 ARG1P05089 322 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 IGHV3-43DP0DP04 118 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 DTYMKP23919 212 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 PAX6P26367 422 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 DYNLT3P51808 116 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 PITPNAQ00169 270 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 GNMTQ14749 295 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 BAK1Q16611 211 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF782Q6ZMW2 699 aaPredicted RBP11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 LHFPL4Q7Z7J7 247 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 HOGA1Q86XE5 327 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 OR11H6Q8NGC7 330 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 OR52L2PQ8NGH6 319 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 FCAMRQ8WWV6 532 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 KIRREL1Q96J84 757 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 RIMS4Q9H426 269 aaPredicted RBP11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 ZNF702PQ9H963 129 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 SCPEP1Q9HB40 452 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 SERTAD4Q9NUC0 356 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 ANAPC10Q9UM13 185 aa11.04□□□□□ -0.64
PDLIM2-213ENST00000448520 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 A6NDX4 124 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 FABP7O15540 132 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 GSTZ1O43708 216 aaPredicted RBP11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 ORC5O43913 435 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 PEX14O75381 377 aa11.03□□□□□ -0.64
PDLIM2-213ENST00000448520 TPPPO94811 219 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms