RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 EBLN2Q6P2I7 272 aa2.58□□□□□ -2
PMS1-216ENST00000447734 ZNF567Q8N184 647 aa2.58□□□□□ -2
PMS1-216ENST00000447734 ZNF676Q8N7Q3 588 aa2.58□□□□□ -2
PMS1-216ENST00000447734 YIPF7Q8N8F6 280 aa2.58□□□□□ -2
PMS1-216ENST00000447734 MCFD2Q8NI22 146 aa2.58□□□□□ -2
PMS1-216ENST00000447734 ABHD14BQ96IU4 210 aa2.58□□□□□ -2
PMS1-216ENST00000447734 PPP1R2P1Q96PQ5 205 aa2.58□□□□□ -2
PMS1-216ENST00000447734 MS4A8Q9BY19 250 aa2.58□□□□□ -2
PMS1-216ENST00000447734 PCBD2Q9H0N5 130 aa2.58□□□□□ -2
PMS1-216ENST00000447734 FAM96AQ9H5X1 160 aa2.58□□□□□ -2
PMS1-216ENST00000447734 ENY2Q9NPA8 101 aa2.58□□□□□ -2
PMS1-216ENST00000447734 C8orf4Q9NR00 106 aa2.58□□□□□ -2
PMS1-216ENST00000447734 OPTCQ9UBM4 332 aa2.58□□□□□ -2
PMS1-216ENST00000447734 PKIGQ9Y2B9 76 aa2.58□□□□□ -2
PMS1-216ENST00000447734 CARHSP1Q9Y2V2 147 aaKnown RBP2.58□□□□□ -2
PMS1-216ENST00000447734 WASHC3Q9Y3C0 194 aa2.58□□□□□ -2
PMS1-216ENST00000447734 PCYT1BQ9Y5K3 369 aaPredicted RBP2.58□□□□□ -2
PMS1-216ENST00000447734 ATRNO75882 1429 aa2.58□□□□□ -2
PMS1-216ENST00000447734 NCOA1Q15788 1441 aa2.58□□□□□ -2
PMS1-216ENST00000447734 LRP4O75096 1905 aa2.58□□□□□ -2
PMS1-216ENST00000447734 COL5A2P05997 1499 aaPredicted RBP2.58□□□□□ -2
PMS1-216ENST00000447734 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
PMS1-216ENST00000447734 OR4C46A6NHA9 309 aa2.57□□□□□ -2
PMS1-216ENST00000447734 C15orf65H3BRN8 121 aa2.57□□□□□ -2
PMS1-216ENST00000447734 H3BSA7 217 aa2.57□□□□□ -2
PMS1-216ENST00000447734 BHLHE40O14503 412 aa2.57□□□□□ -2
PMS1-216ENST00000447734 SRSF10O75494 262 aaKnown RBP2.57□□□□□ -2
PMS1-216ENST00000447734 STK16O75716 305 aa2.57□□□□□ -2
PMS1-216ENST00000447734 TTRP02766 147 aa2.57□□□□□ -2
PMS1-216ENST00000447734 ESDP10768 282 aa2.57□□□□□ -2
PMS1-216ENST00000447734 KCNE1P15382 129 aa2.57□□□□□ -2
PMS1-216ENST00000447734 IL1RNP18510 177 aa2.57□□□□□ -2
PMS1-216ENST00000447734 MPIP34949 423 aa2.57□□□□□ -2
PMS1-216ENST00000447734 OPRK1P41145 380 aa2.57□□□□□ -2
PMS1-216ENST00000447734 CXCL12P48061 93 aa2.57□□□□□ -2
PMS1-216ENST00000447734 VEGFCP49767 419 aa2.57□□□□□ -2
PMS1-216ENST00000447734 CRYBA4P53673 196 aa2.57□□□□□ -2
PMS1-216ENST00000447734 WNT4P56705 351 aa2.57□□□□□ -2
PMS1-216ENST00000447734 ALX1Q15699 326 aa2.57□□□□□ -2
PMS1-216ENST00000447734 UBE2SQ16763 222 aa2.57□□□□□ -2
PMS1-216ENST00000447734 HES3Q5TGS1 186 aa2.57□□□□□ -2
PMS1-216ENST00000447734 CYB5R2Q6BCY4 276 aa2.57□□□□□ -2
PMS1-216ENST00000447734 ZFP1Q6P2D0 407 aa2.57□□□□□ -2
PMS1-216ENST00000447734 ALKAL1Q6UXT8 129 aa2.57□□□□□ -2
PMS1-216ENST00000447734 WDR86Q86TI4 376 aa2.57□□□□□ -2
PMS1-216ENST00000447734 DEFB125Q8N687 156 aa2.57□□□□□ -2
PMS1-216ENST00000447734 OR4X1Q8NH49 305 aa2.57□□□□□ -2
PMS1-216ENST00000447734 LINC01560Q8TB33 94 aa2.57□□□□□ -2
PMS1-216ENST00000447734 CIRBP-AS1Q8TBR5 109 aa2.57□□□□□ -2
PMS1-216ENST00000447734 RASSF5Q8WWW0 418 aa2.57□□□□□ -2
PMS1-216ENST00000447734 BORCS7Q96B45 105 aa2.57□□□□□ -2
PMS1-216ENST00000447734 RBMXL1Q96E39 390 aaKnown RBP2.57□□□□□ -2
PMS1-216ENST00000447734 SLC25A44Q96H78 314 aaPredicted RBP2.57□□□□□ -2
PMS1-216ENST00000447734 SFRP2Q96HF1 295 aa2.57□□□□□ -2
PMS1-216ENST00000447734 GPR82Q96P67 336 aa2.57□□□□□ -2
PMS1-216ENST00000447734 MED28Q9H204 178 aa2.57□□□□□ -2
PMS1-216ENST00000447734 LHX9Q9NQ69 397 aa2.57□□□□□ -2
PMS1-216ENST00000447734 ZNF355PQ9NSJ1 428 aa2.57□□□□□ -2
PMS1-216ENST00000447734 TMEM38BQ9NVV0 291 aa2.57□□□□□ -2
PMS1-216ENST00000447734 TAS2R1Q9NYW7 299 aa2.57□□□□□ -2
PMS1-216ENST00000447734 FIS1Q9Y3D6 152 aa2.57□□□□□ -2
PMS1-216ENST00000447734 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
PMS1-216ENST00000447734 OR6C6A6NF89 314 aa2.56□□□□□ -2
PMS1-216ENST00000447734 C4orf51C9J302 202 aa2.56□□□□□ -2
PMS1-216ENST00000447734 TMX2-CTNND1H3BSU7 103 aa2.56□□□□□ -2
PMS1-216ENST00000447734 ZNF861PO60384 105 aa2.56□□□□□ -2
PMS1-216ENST00000447734 DEDDO75618 318 aa2.56□□□□□ -2
PMS1-216ENST00000447734 CD28P10747 220 aa2.56□□□□□ -2
PMS1-216ENST00000447734 CNTFRP26992 372 aa2.56□□□□□ -2
PMS1-216ENST00000447734 TAS2R41P59536 307 aa2.56□□□□□ -2
PMS1-216ENST00000447734 BTN3A2P78410 334 aa2.56□□□□□ -2
PMS1-216ENST00000447734 ELF3P78545 371 aaPredicted RBP2.56□□□□□ -2
PMS1-216ENST00000447734 KLHL12Q53G59 568 aa2.56□□□□□ -2
PMS1-216ENST00000447734 ZNF678Q5SXM1 525 aa2.56□□□□□ -2
PMS1-216ENST00000447734 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
PMS1-216ENST00000447734 SBSNQ6UWP8 590 aa2.56□□□□□ -2
PMS1-216ENST00000447734 SLC35F6Q8N357 371 aa2.56□□□□□ -2
PMS1-216ENST00000447734 OR2T4Q8NH00 348 aa2.56□□□□□ -2
PMS1-216ENST00000447734 PYDC1Q8WXC3 89 aa2.56□□□□□ -2
PMS1-216ENST00000447734 SLC25A46Q96AG3 418 aa2.56□□□□□ -2
PMS1-216ENST00000447734 ELSPBP1Q96BH3 223 aa2.56□□□□□ -2
PMS1-216ENST00000447734 PHYHIPLQ96FC7 376 aa2.56□□□□□ -2
PMS1-216ENST00000447734 CPNE2Q96FN4 548 aaPredicted RBP2.56□□□□□ -2
PMS1-216ENST00000447734 OR2V2Q96R30 315 aa2.56□□□□□ -2
PMS1-216ENST00000447734 TRIB3Q96RU7 358 aa2.56□□□□□ -2
PMS1-216ENST00000447734 NDFIP1Q9BT67 221 aa2.56□□□□□ -2
PMS1-216ENST00000447734 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
PMS1-216ENST00000447734 ZNF430Q9H8G1 570 aaPredicted RBP2.56□□□□□ -2
PMS1-216ENST00000447734 C19orf12Q9NSK7 152 aa2.56□□□□□ -2
PMS1-216ENST00000447734 RWDD2AQ9UIY3 292 aa2.56□□□□□ -2
PMS1-216ENST00000447734 DNAJC12Q9UKB3 198 aa2.56□□□□□ -2
PMS1-216ENST00000447734 PXMP4Q9Y6I8 212 aa2.56□□□□□ -2
PMS1-216ENST00000447734 CAMSAP1Q5T5Y3 1602 aa2.56□□□□□ -2
PMS1-216ENST00000447734 PBRM1Q86U86 1689 aa2.56□□□□□ -2
PMS1-216ENST00000447734 LTBP1Q14766 1721 aa2.56□□□□□ -2
PMS1-216ENST00000447734 A0A096LNJ9 63 aa2.55□□□□□ -2
PMS1-216ENST00000447734 FAM159BA6NKW6 160 aa2.55□□□□□ -2
PMS1-216ENST00000447734 RBFOX2O43251 390 aaKnown RBP eCLIP2.55□□□□□ -2
PMS1-216ENST00000447734 ZNF207O43670 478 aaKnown RBP2.55□□□□□ -2
PMS1-216ENST00000447734 PDE6DO43924 150 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms