RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 UFD1Q92890 307 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 DUX3Q96PT4 197 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 P2RX4Q99571 388 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 ABHD14AQ9BUJ0 271 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 TPRKBQ9Y3C4 175 aa16.29■□□□□ 0.2
SDC1-205ENST00000447124 NAPSAO96009 420 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 RPLP1P05386 114 aaKnown RBP16.28■□□□□ 0.2
SDC1-205ENST00000447124 OR3A3P47888 321 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 ZNF880Q6PDB4 577 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 TEX38Q6PEX7 206 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 KLHL30-AS1Q8NEE0 82 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 GALMQ96C23 342 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 NABP2Q9BQ15 211 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 MRPL20Q9BYC9 149 aaKnown RBP16.28■□□□□ 0.2
SDC1-205ENST00000447124 LPAR5Q9H1C0 372 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 LRRC42Q9Y546 428 aa16.28■□□□□ 0.2
SDC1-205ENST00000447124 WI2-2373I1.2A0A1W2PRP0 233 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 SOCS1O15524 211 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 DUS4LO95620 317 aaKnown RBP16.27■□□□□ 0.2
SDC1-205ENST00000447124 HSMCR30P0CW71 290 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 BLVRBP30043 206 aaPredicted RBP16.27■□□□□ 0.2
SDC1-205ENST00000447124 HOXD3P31249 432 aaPredicted RBP16.27■□□□□ 0.2
SDC1-205ENST00000447124 MAP2K4P45985 399 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 CFHR3Q02985 330 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 P2RY14Q15391 338 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 ZNF695Q8IW36 515 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 OR51D1Q8NGF3 324 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 OR6M1Q8NGM8 313 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 ISYNA1Q9NPH2 558 aa16.27■□□□□ 0.2
SDC1-205ENST00000447124 AK6Q9Y3D8 172 aaKnown RBP16.27■□□□□ 0.2
SDC1-205ENST00000447124 NUDT19A8MXV4 375 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 RGS10O43665 173 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 BPNT1O95861 308 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 CRHBPP24387 322 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 CNTFRP26992 372 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 SOX6P35712 828 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 EGFEM1PQ0D2K5 195 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 ZNF833PQ6ZTB9 187 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 SVOPQ8N4V2 548 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 FAM89BQ8N5H3 189 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 RNF152Q8N8N0 203 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 RAX2Q96IS3 184 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 ANKRD60Q9BZ19 345 aa16.26■□□□□ 0.19
SDC1-205ENST00000447124 FOXI3A8MTJ6 420 aaPredicted RBP16.25■□□□□ 0.19
SDC1-205ENST00000447124 SLC2A2P11168 524 aaPredicted RBP16.25■□□□□ 0.19
SDC1-205ENST00000447124 CPEP16870 476 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 SLC6A1P30531 599 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 TMEM50BP56557 158 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 ACTBP60709 375 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 ZNF251Q9BRH9 671 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 HDHD3Q9BSH5 251 aaPredicted RBP16.25■□□□□ 0.19
SDC1-205ENST00000447124 PARP12Q9H0J9 701 aaKnown RBP16.25■□□□□ 0.19
SDC1-205ENST00000447124 IFI27L2Q9H2X8 130 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 PLEKHJ1Q9NW61 149 aa16.25■□□□□ 0.19
SDC1-205ENST00000447124 SAA2-SAA4A0A096LPE2 208 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 SLC17A2O00624 439 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 RGS11O94810 467 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 IGF1P05019 195 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 ELANEP08246 267 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 SAA2P0DJI9 122 aaPredicted RBP16.24■□□□□ 0.19
SDC1-205ENST00000447124 FABP5Q01469 135 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 MLLT11Q13015 90 aaPredicted RBP16.24■□□□□ 0.19
SDC1-205ENST00000447124 FOXE3Q13461 319 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 IL1F10Q8WWZ1 152 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 CCDC90BQ9GZT6 254 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 AK3Q9UIJ7 227 aa16.24■□□□□ 0.19
SDC1-205ENST00000447124 TRBV6-6A0A0A6YYG2 114 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 CCL24O00175 119 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 ST8SIA5O15466 376 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 IGHG4P01861 327 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 ARSBP15848 533 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 CDX1P47902 265 aaPredicted RBP16.23■□□□□ 0.19
SDC1-205ENST00000447124 CLDN12P56749 244 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 KIR2DS1Q14954 304 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 MMDQ15546 238 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 CXorf66Q5JRM2 361 aaPredicted RBP16.23■□□□□ 0.19
SDC1-205ENST00000447124 PRSS48Q7RTY5 328 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 SETD6Q8TBK2 473 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 KCTD7Q96MP8 289 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 MGLLQ99685 303 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 GON7Q9BXV9 100 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 PLGRKTQ9HBL7 147 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 CHMP1AQ9HD42 196 aaPredicted RBP16.23■□□□□ 0.19
SDC1-205ENST00000447124 ABRACLQ9P1F3 81 aa16.23■□□□□ 0.19
SDC1-205ENST00000447124 ZNF107Q9UII5 783 aaPredicted RBP16.23■□□□□ 0.19
SDC1-205ENST00000447124 PLA2G7Q13093 441 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 KIAA0141Q14154 515 aaPredicted RBP16.22■□□□□ 0.19
SDC1-205ENST00000447124 TRAM1Q15629 374 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 DEFB136Q30KP8 78 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 C2orf76Q3KRA6 126 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 RPL39P5Q59GN2 51 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 OR2AK2Q8NG84 335 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 ZNF580Q9UK33 172 aa16.22■□□□□ 0.19
SDC1-205ENST00000447124 IGHV7-81A0A0B4J1V7 117 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 G3V318 75 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
SDC1-205ENST00000447124 CT45A6P0DMU7 189 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 CT45A5P0DMU8 189 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 CT45A7P0DMV0 189 aa16.21■□□□□ 0.19
SDC1-205ENST00000447124 PSMB8P28062 276 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms