RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 PRSS22Q9GZN4 317 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 RIMS4Q9H426 269 aaPredicted RBP11.84□□□□□ -0.51
HDAC4-204ENST00000446876 Q9N2K0 584 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 SERTAD4Q9NUC0 356 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
HDAC4-204ENST00000446876 TRRAPQ9Y4A5 3859 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 TET2Q6N021 2002 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-204ENST00000446876 TRIM64CA6NLI5 447 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 ZNF736B4DX44 427 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-204ENST00000446876 AMY1AP04745 511 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 AMY2AP04746 511 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 SCTP09683 121 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 CD3GP09693 182 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 SMIM18P0DKX4 95 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 HIST1H1DP16402 221 aaKnown RBP11.83□□□□□ -0.52
HDAC4-204ENST00000446876 TMEM11P17152 192 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 ABCA11PQ4W5N1 156 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 IDNKQ5T6J7 187 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 C16orf82Q7Z2V1 217 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 ODF3L1Q8IXM7 274 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 OR5H6Q8NGV6 325 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 MAFIPQ8WZ33 124 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 SLC23A1Q9UHI7 598 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 ELF5Q9UKW6 265 aaPredicted RBP11.83□□□□□ -0.52
HDAC4-204ENST00000446876 FBN3Q75N90 2809 aa11.83□□□□□ -0.52
HDAC4-204ENST00000446876 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 METTL21EPA6NDL7 271 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 ST8SIA5O15466 376 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 AIREO43918 545 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 YPEL1O60688 119 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 OR3A3P47888 321 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 ZNF137PP52743 207 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 THNSL2Q86YJ6 484 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 TGIF2LXQ8IUE1 241 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 PTX4Q96A99 478 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 AKR1E2Q96JD6 320 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 YPEL2Q96QA6 119 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 IFI27L2Q9H2X8 130 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 ZNF230Q9UIE0 474 aaPredicted RBP11.82□□□□□ -0.52
HDAC4-204ENST00000446876 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
HDAC4-204ENST00000446876 RGS11O94810 467 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 LPLP06858 475 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 FCGR3AP08637 254 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 VDAC2P45880 294 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-204ENST00000446876 MRPS15P82914 257 aaKnown RBP11.81□□□□□ -0.52
HDAC4-204ENST00000446876 TIMM50Q3ZCQ8 353 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 C9orf152Q5JTZ5 239 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 STEAP3Q658P3 488 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 OR2AK2Q8NG84 335 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 EAF1Q96JC9 268 aaPredicted RBP11.81□□□□□ -0.52
HDAC4-204ENST00000446876 MRPL20Q9BYC9 149 aaKnown RBP11.81□□□□□ -0.52
HDAC4-204ENST00000446876 CMYA5Q8N3K9 4069 aa11.81□□□□□ -0.52
HDAC4-204ENST00000446876 SAA2-SAA4A0A096LPE2 208 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 TRDCB7Z8K6 153 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 LANCL1O43813 399 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 SAA2P0DJI9 122 aaPredicted RBP11.8□□□□□ -0.52
HDAC4-204ENST00000446876 ARFRP1Q13795 201 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 HERPUD1Q15011 391 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 PRR31Q5SQ13 230 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 IZUMO1Q8IYV9 350 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 SLC25A38Q96DW6 304 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 FUNDC2Q9BWH2 189 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 RHBDL2Q9NX52 303 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 MGAT4AQ9UM21 535 aa11.8□□□□□ -0.52
HDAC4-204ENST00000446876 FABP7O15540 132 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 HSPA12AO43301 675 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 TXNL1O43396 289 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 PEX14O75381 377 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 TSPAN15O95858 294 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 GSTT2P0CG29 244 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 GSTT2BP0CG30 244 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 CD28P10747 220 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 RPS19P39019 145 aaKnown RBP11.79□□□□□ -0.52
HDAC4-204ENST00000446876 CEACAM6P40199 344 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 NCS1P62166 190 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 LSAMPQ13449 338 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 EBI3Q14213 229 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 CDNFQ49AH0 187 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 RPL39P5Q59GN2 51 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 LY6G6FQ5SQ64 297 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 ZNF833PQ6ZTB9 187 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 Q8N6K4 173 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 C5orf56Q8N8D9 126 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 ABHD14BQ96IU4 210 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 WNT10AQ9GZT5 417 aa11.79□□□□□ -0.52
HDAC4-204ENST00000446876 C11orf54Q9H0W9 315 aaPredicted RBP11.79□□□□□ -0.52
HDAC4-204ENST00000446876 IGKV1D-8A0A087WSZ0 117 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 TMEM235A6NFC5 223 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 SERPINE3A8MV23 424 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 ZBTB25P24278 435 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 CD1BP29016 333 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 IGSF11Q5DX21 431 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 DTX3Q8N9I9 347 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 OR13F1Q8NGS4 319 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 OR2T10Q8NGZ9 312 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 WIPF2Q8TF74 440 aaPredicted RBP11.78□□□□□ -0.52
HDAC4-204ENST00000446876 NUDCD2Q8WVJ2 157 aa11.78□□□□□ -0.52
HDAC4-204ENST00000446876 NABP2Q9BQ15 211 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms