RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 OR14A2Q96R54 314 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 MGLLQ99685 303 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 TMED9Q9BVK6 235 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 PRSS22Q9GZN4 317 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 FAM234AQ9H0X4 552 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 METTL9Q9H1A3 318 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 WDR13Q9H1Z4 485 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 PPP1R3EQ9H7J1 279 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 HES4Q9HCC6 221 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 EXOSC4Q9NPD3 245 aaKnown RBP5.56□□□□□ -1.52
HDAC9-216ENST00000446646 ACOT13Q9NPJ3 140 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 TAS2R4Q9NYW5 299 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 OR14J1Q9UGF5 321 aa5.56□□□□□ -1.52
HDAC9-216ENST00000446646 IGKV1-9A0A0C4DH69 117 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 RFPL4AA6NLU0 287 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 RFPL4AL1F8VTS6 287 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 CCRL2O00421 344 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 RAMP3O60896 148 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 KDM4BO94953 1096 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 LALBAP00709 142 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 UBBP0CG47 229 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 PSG2P11465 335 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 PRKACAP17612 351 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 GABRR1P24046 479 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 MYL9P24844 172 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 PSMB9P28065 219 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 PRDX2P32119 198 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 SNU13P55769 128 aaKnown RBP5.55□□□□□ -1.52
HDAC9-216ENST00000446646 IRF3Q14653 427 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 TIMM50Q3ZCQ8 353 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 HSD17B12Q53GQ0 312 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 CST9LP1Q5W188 147 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 TMEM200BQ69YZ2 307 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 AWAT2Q6E213 333 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF773Q6PK81 442 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF788Q6ZQV5 615 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 GDPD3Q7L5L3 318 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 CENPVQ7Z7K6 275 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-216ENST00000446646 CALHM1Q8IU99 346 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 PXT1Q8NFP0 134 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 OR5T2Q8NGG2 359 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 OR5D18Q8NGL1 313 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 CAPSLQ8WWF8 208 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 RGP1Q92546 391 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-216ENST00000446646 RFT1Q96AA3 541 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 ISOC1Q96CN7 298 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 SDSLQ96GA7 329 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 DERL3Q96Q80 235 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 P2RX4Q99571 388 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 FGF23Q9GZV9 251 aaPredicted RBP5.55□□□□□ -1.52
HDAC9-216ENST00000446646 CST11Q9H112 138 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 GHRLQ9UBU3 117 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 KCNK7Q9Y2U2 307 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 LSM2Q9Y333 95 aaKnown RBP5.55□□□□□ -1.52
HDAC9-216ENST00000446646 LRRC42Q9Y546 428 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 MYCBP2O75592 4640 aa5.55□□□□□ -1.52
HDAC9-216ENST00000446646 TNCP24821 2201 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 FAT1Q14517 4588 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 IGKV1D-17A0A075B6S4 117 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 IGKV1-27A0A075B6S5 117 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 A0A087WXM4 84 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 TRBV5-7A0A0A0MS05 114 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 A0A1W2PN81 502 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SMIM30A4D0T7 59 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 M0R1W7 72 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 PDCD5O14737 125 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 GPX5O75715 221 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 HAND1O96004 215 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 MAS1P04201 325 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 GTF2F2P13984 249 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF44P15621 663 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 BCL3P20749 454 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 COX7A1P24310 79 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 CHRNA7P36544 502 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 PTGFRP43088 359 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 KCNJ3P48549 501 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 CEBPDP49716 269 aaPredicted RBP5.54□□□□□ -1.52
HDAC9-216ENST00000446646 VEGFCP49767 419 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SLURP1P55000 103 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ERVK11-1P61568 191 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 RPL31P62899 125 aaKnown RBP5.54□□□□□ -1.52
HDAC9-216ENST00000446646 TPBGQ13641 420 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 IL13RA2Q14627 380 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF146Q15072 292 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ACSM3Q53FZ2 586 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 NCR3LG1Q68D85 454 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF529Q6P280 563 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 CEACAM19Q7Z692 300 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SLC51BQ86UW2 128 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF680Q8NEM1 530 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 OR52N4Q8NGI2 321 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 OR13C5Q8NGS8 318 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 MITD1Q8WV92 249 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 GLMPQ8WWB7 406 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 LINC00476Q8WZB0 136 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 CORO2AQ92828 525 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 MRPS24Q96EL2 167 aaKnown RBP5.54□□□□□ -1.52
HDAC9-216ENST00000446646 SNX22Q96L94 193 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 ZNF488Q96MN9 340 aa5.54□□□□□ -1.52
HDAC9-216ENST00000446646 GAFA1Q96PS6 74 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms