RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ROS1P08922 2347 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 POLEQ07864 2286 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 C16orf97H3BN30 126 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 TXNL1O43396 289 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 SSSCA1O60232 199 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 GFRA3O60609 400 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 SCO1O75880 301 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 CCKARP32238 428 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 CFHR2P36980 270 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 GLIPR1P48060 266 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 VAMP2P63027 116 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 MOGAT3Q86VF5 341 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 DRAM1Q8N682 238 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 BSCL2Q96G97 398 aaPredicted RBP11.47□□□□□ -0.57
RBM39-216ENST00000444878 MAGT1Q9H0U3 335 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 LIN7CQ9NUP9 197 aaKnown RBP11.47□□□□□ -0.57
RBM39-216ENST00000444878 ELOVL5Q9NYP7 299 aa11.47□□□□□ -0.57
RBM39-216ENST00000444878 BORCS7-ASMTA0A0B4J1R7 106 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 WRBO00258 174 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 CAV2P51636 162 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 NHLH1Q02575 133 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 NHLH2Q02577 135 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 FAM90A1Q86YD7 464 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 GCSAMQ8N6F7 178 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 OR52L2PQ8NGH6 319 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 ITLN1Q8WWA0 313 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 ARL11Q969Q4 196 aa11.46□□□□□ -0.57
RBM39-216ENST00000444878 MRPL37Q9BZE1 423 aaKnown RBP11.46□□□□□ -0.57
RBM39-216ENST00000444878 DYSFO75923 2080 aa11.46□□□□□ -0.58
RBM39-216ENST00000444878 DSCAML1Q8TD84 2053 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 EPHA1P21709 976 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 ID3Q02535 119 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 EDDM3AQ14507 147 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 SPRNQ5BIV9 151 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 TMEM108Q6UXF1 575 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 ZNF645Q8N7E2 425 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 OR13A1Q8NGR1 328 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 PPP1R35Q8TAP8 253 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
RBM39-216ENST00000444878 LURAP1Q96LR2 239 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 C11orf1Q9H5F2 150 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 ZNF835Q9Y2P0 537 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 IGKV1D-17A0A075B6S4 117 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 A0A0G2JRQ6 117 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 RAB19A4D1S5 217 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 FAM24AA6NFZ4 105 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 RNF212BA8MTL3 300 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 NXPH3O95157 252 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 FAM87AP0C7U9 286 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 SSTR5P35346 364 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 AKR1C2P52895 323 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
RBM39-216ENST00000444878 PRR30Q53SZ7 412 aaPredicted RBP11.45□□□□□ -0.58
RBM39-216ENST00000444878 GPR146Q96CH1 333 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 OR2D2Q9H210 308 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 RNF150Q9ULK6 438 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 TANC2Q9HCD6 1990 aa11.45□□□□□ -0.58
RBM39-216ENST00000444878 IGHV3OR15-7A0A075B7D8 119 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 A0A1B0GU03 582 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 PGPEP1LA6NFU8 196 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 ZNF737O75373 536 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 MED6O75586 246 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 SLC25A6P12236 298 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 SULT1A2P50226 295 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 PAX5Q02548 391 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 UQCC3Q6UW78 93 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 WFDC8Q8IUA0 241 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 STPG2Q8N412 459 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 ZBTB34Q8NCN2 500 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 NARS2Q96I59 477 aaKnown RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 SMIM8Q96KF7 97 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 SLC25A31Q9H0C2 315 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 WFDC1Q9HC57 220 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 LYRM2Q9NU23 88 aaPredicted RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 SPTA1P02549 2419 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 MEX3AA1L020 520 aaKnown RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 SPINT2O43291 252 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 IGKV1-39P01597 117 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 IGKV1D-39P04432 117 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 MMP9P14780 707 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 PTAFRP25105 342 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 PPP1CCP36873 323 aaKnown RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 TMPRSS3P57727 454 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 RBPJQ06330 500 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 PXDC1Q5TGL8 231 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 FAM53AQ6NSI3 398 aaPredicted RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 NUP37Q8NFH4 326 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 RFESDQ8TAC1 157 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 LSM10Q969L4 123 aaKnown RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 SNX22Q96L94 193 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 TOLLIPQ9H0E2 274 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 ARV1Q9H2C2 271 aa11.44□□□□□ -0.58
RBM39-216ENST00000444878 ESRP2Q9H6T0 727 aaKnown RBP11.44□□□□□ -0.58
RBM39-216ENST00000444878 SPTBN4Q9H254 2564 aa11.43□□□□□ -0.58
RBM39-216ENST00000444878 IGF2RP11717 2491 aa11.43□□□□□ -0.58
RBM39-216ENST00000444878 DOCK11Q5JSL3 2073 aa11.43□□□□□ -0.58
RBM39-216ENST00000444878 NUDT19A8MXV4 375 aa11.43□□□□□ -0.58
RBM39-216ENST00000444878 MGST3O14880 152 aa11.43□□□□□ -0.58
RBM39-216ENST00000444878 CHST1O43916 411 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms