RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ROPN1LQ96C74 230 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 TM4SF18Q96CE8 201 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 NEURL3Q96EH8 262 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 SIGLEC12Q96PQ1 595 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 RNF157Q96PX1 679 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 OR7D2Q96RA2 312 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 LINC01587Q99440 93 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 ANAPC13Q9BS18 74 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 SLC25A2Q9BXI2 301 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 RNASE7Q9H1E1 156 aaKnown RBP3.36□□□□□ -1.87
VPS50-206ENST00000443443 ZDHHC11Q9H8X9 412 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 NOX3Q9HBY0 568 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 PRTFDC1Q9NRG1 225 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 ACER3Q9NUN7 267 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 WASHC3Q9Y3C0 194 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 CCNB3Q8WWL7 1395 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 WRNQ14191 1432 aaPredicted RBP eCLIP3.36□□□□□ -1.87
VPS50-206ENST00000443443 PTPRKQ15262 1439 aa3.36□□□□□ -1.87
VPS50-206ENST00000443443 GRIN2BQ13224 1484 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 MYBPHLA2RUH7 354 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 TRAPPC13A5PLN9 417 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 C5orf58C9J3I9 102 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 TRAPPC2LH3BP13 241 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 H7C1C5 153 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 ANGPTL7O43827 346 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 TPST1O60507 370 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 EIF1BO60739 113 aaKnown RBP3.35□□□□□ -1.87
VPS50-206ENST00000443443 DUSP14O95147 198 aaKnown RBP3.35□□□□□ -1.87
VPS50-206ENST00000443443 NDUFC2O95298 119 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 FGF6P10767 208 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 PGAM2P15259 253 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 SPI1P17947 270 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 EIF1P41567 113 aaKnown RBP3.35□□□□□ -1.87
VPS50-206ENST00000443443 RPL34P49207 117 aaKnown RBP3.35□□□□□ -1.87
VPS50-206ENST00000443443 HERVK_113P61574 105 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 TBPL1P62380 186 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 LCN6P62502 163 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 IL15RAQ13261 267 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 PRR4Q16378 134 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 Q1RN00 199 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 ZNF404Q494X3 552 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 PRR30Q53SZ7 412 aaPredicted RBP3.35□□□□□ -1.87
VPS50-206ENST00000443443 MESTQ5EB52 335 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 NHLRC3Q5JS37 347 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 NXNL2Q5VZ03 156 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 LCN8Q6JVE9 175 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 ARL9Q6T311 187 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 C4orf22Q6V702 233 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 FBXW12Q6X9E4 464 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 SLC25A45Q8N413 288 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 DEFB125Q8N687 156 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 OR4D11Q8NGI4 311 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 OR10G4Q8NGN3 311 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 OR9Q1Q8NGQ5 310 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 CT55Q8WUE5 264 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 TWIST2Q8WVJ9 160 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 ITLN1Q8WWA0 313 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 MBD3L1Q8WWY6 194 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 CAPZA3Q96KX2 299 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 C12orf57Q99622 126 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 HSPB9Q9BQS6 159 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 TMEM243Q9BU79 118 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 C1orf50Q9BV19 199 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 PARP12Q9H0J9 701 aaKnown RBP3.35□□□□□ -1.87
VPS50-206ENST00000443443 PTGES2Q9H7Z7 377 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 SLCO1B3Q9NPD5 702 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 PARP11Q9NR21 331 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 CCL28Q9NRJ3 127 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 UQCC1Q9NVA1 299 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 PSG8Q9UQ74 426 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 POMPQ9Y244 141 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 RTL9Q8NET4 1388 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 KIF15Q9NS87 1388 aa3.35□□□□□ -1.87
VPS50-206ENST00000443443 RLFQ13129 1914 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 MYO15BQ96JP2 1530 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 TRAV8-1A0A0A6YYK1 113 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 IGHV2-26A0A0B4J1V2 119 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 OR5H1A6NKK0 313 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 CD300LBA8K4G0 201 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 ZNF850A8MQ14 1090 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 AIPO00170 330 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 FFAR1O14842 300 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 DEGS1O15121 323 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 RTL8CO15255 209 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 CHST10O43529 356 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 IGHV3-48P01763 117 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 SERPINE1P05121 402 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 OR12D1P0DN82 309 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 GPX2P18283 190 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 CDK2P24941 298 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 HSPA9P38646 679 aaKnown RBP3.34□□□□□ -1.87
VPS50-206ENST00000443443 PSMD8P48556 350 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 SERPINB10P48595 397 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 EMP1P54849 157 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 CTBP2P56545 445 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 NCALDP61601 193 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 REG3AQ06141 175 aa3.34□□□□□ -1.87
VPS50-206ENST00000443443 TMEM267Q0VDI3 215 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms