RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 NIT1Q86X76 327 aa13.63□□□□□ -0.23
DHFR-201ENST00000439211 TIAF1O95411 115 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 PSG1P11464 419 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 SRFP11831 508 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 RHBDD2Q6NTF9 364 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 GUSBP11Q6P575 273 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 SPACA9Q96E40 222 aaPredicted RBP13.62□□□□□ -0.23
DHFR-201ENST00000439211 KIAA1324LA8MWY0 1029 aaPredicted RBP13.62□□□□□ -0.23
DHFR-201ENST00000439211 CD99P14209 185 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 OTX2P32243 289 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 CDKN1AP38936 164 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 HTD2P86397 168 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 PLPPR5Q32ZL2 321 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 COA6Q5JTJ3 125 aaKnown RBP13.62□□□□□ -0.23
DHFR-201ENST00000439211 OR5AS1Q8N127 324 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 UCN2Q96RP3 112 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 FSCN3Q9NQT6 498 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 SELENOKQ9Y6D0 94 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 A0A1W2PR77 199 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 IGHMP01871 453 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 FFAR4Q5NUL3 377 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 MRGPRGQ86SM5 289 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 BOD1Q96IK1 185 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 PECRQ9BY49 303 aa13.62□□□□□ -0.23
DHFR-201ENST00000439211 CISD1Q9NZ45 108 aaKnown RBP13.62□□□□□ -0.23
DHFR-201ENST00000439211 TRAV39A0A0B4J263 110 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 NKX2-6A6NCS4 301 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 WIPF3A6NGB9 483 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 PFN1P07737 140 aaKnown RBP13.61□□□□□ -0.23
DHFR-201ENST00000439211 KITLGP21583 273 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 SOX8P57073 446 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 MRPL49Q13405 166 aaKnown RBP13.61□□□□□ -0.23
DHFR-201ENST00000439211 LIAT1Q6ZQX7 453 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 WFDC8Q8IUA0 241 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 SLC25A45Q8N413 288 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 ZNF439Q8NDP4 499 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 OR8G5Q8NG78 346 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 EML5Q05BV3 1969 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 A0A0A6YYD4 124 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 IGSF23A1L1A6 192 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 H3BMH7 237 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 GYPAP02724 150 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 IL15RAQ13261 267 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 RASL10BQ96S79 203 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 RPRMQ9NS64 109 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 WASHC3Q9Y3C0 194 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 TRANK1O15050 2925 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 ZNF816-ZNF321PA0A0X1KG74 233 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 A0A1W2PRS3 328 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 SERPINE3A8MV23 424 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 DHHO43323 396 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 PITX3O75364 302 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 KMT5CQ86Y97 462 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 CLN8Q9UBY8 286 aa13.61□□□□□ -0.23
DHFR-201ENST00000439211 EFNA2O43921 213 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 TMEM267Q0VDI3 215 aaPredicted RBP13.6□□□□□ -0.23
DHFR-201ENST00000439211 SNAI3Q3KNW1 292 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 YRDCQ86U90 279 aaKnown RBP13.6□□□□□ -0.23
DHFR-201ENST00000439211 SGMS2Q8NHU3 365 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 MRPL30Q8TCC3 161 aaKnown RBP13.6□□□□□ -0.23
DHFR-201ENST00000439211 TNFRSF14Q92956 283 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 PHF7Q9BWX1 381 aaPredicted RBP13.6□□□□□ -0.23
DHFR-201ENST00000439211 K7EP13 123 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 CELA2AP08217 269 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 PLCXD3Q63HM9 321 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 TCF23Q7RTU1 214 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 IMMP2LQ96T52 175 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 AKIRIN1Q9H9L7 192 aaPredicted RBP13.6□□□□□ -0.23
DHFR-201ENST00000439211 DHRS3O75911 302 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 SERF1AO75920 110 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 NECAP2Q9NVZ3 263 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 THADAQ6YHU6 1953 aa13.6□□□□□ -0.23
DHFR-201ENST00000439211 CRYM-AS1A6NIL9 109 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 FCN1O00602 326 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 TNFSF11O14788 317 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 TAS2R30P59541 319 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 SRYQ05066 204 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 PINX1Q96BK5 328 aaKnown RBP13.59□□□□□ -0.23
DHFR-201ENST00000439211 C5orf63A6NC05 138 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 GNG7O60262 68 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 B4GALT1P15291 398 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 CD46P15529 392 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 RPL23P62829 140 aaKnown RBP13.59□□□□□ -0.23
DHFR-201ENST00000439211 CLUHP3Q96NS8 147 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 SPINK4O60575 86 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 AADACP22760 399 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 CCL7P80098 99 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 PMP22Q01453 160 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 SHBQ15464 509 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 TDHQ8IZJ6 230 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 PRRG4Q9BZD6 226 aa13.59□□□□□ -0.23
DHFR-201ENST00000439211 OR7C2O60412 319 aa13.58□□□□□ -0.23
DHFR-201ENST00000439211 IL3RAP26951 378 aa13.58□□□□□ -0.23
DHFR-201ENST00000439211 MEF2BQ02080 365 aaPredicted RBP13.58□□□□□ -0.23
DHFR-201ENST00000439211 MALLQ13021 153 aa13.58□□□□□ -0.23
DHFR-201ENST00000439211 CXorf66Q5JRM2 361 aaPredicted RBP13.58□□□□□ -0.23
DHFR-201ENST00000439211 ACTL10Q5JWF8 245 aa13.58□□□□□ -0.23
DHFR-201ENST00000439211 CYP2G1PQ6ZSU1 146 aa13.58□□□□□ -0.23
DHFR-201ENST00000439211 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms