RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 MOB3BQ86TA1 216 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 THNSL2Q86YJ6 484 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 Q8N6K4 173 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 OR2T6Q8NHC8 308 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 SGMS2Q8NHU3 365 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 LGALS14Q8TCE9 139 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 IL1F10Q8WWZ1 152 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 MAFIPQ8WZ33 124 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 SLC25A38Q96DW6 304 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 RAB3CQ96E17 227 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 YPEL2Q96QA6 119 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 CMSS1Q9BQ75 279 aaKnown RBP10.56□□□□□ -0.72
LINC00399-201ENST00000439008 WNT10AQ9GZT5 417 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 IFI27L2Q9H2X8 130 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 CHMP1AQ9HD42 196 aaPredicted RBP10.56□□□□□ -0.72
LINC00399-201ENST00000439008 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
LINC00399-201ENST00000439008 TET2Q6N021 2002 aaPredicted RBP10.55□□□□□ -0.72
LINC00399-201ENST00000439008 A0A075B6Q4 140 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 IGKV1D-8A0A087WSZ0 117 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 PROP1O75360 226 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 CD3GP09693 182 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 VSIG10L2P0DP72 767 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 HIST1H1DP16402 221 aaKnown RBP10.55□□□□□ -0.72
LINC00399-201ENST00000439008 LSM3P62310 102 aaKnown RBP10.55□□□□□ -0.72
LINC00399-201ENST00000439008 HLA-DRB3P79483 266 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 TMEM30BQ3MIR4 351 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 ABCA11PQ4W5N1 156 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 STEAP3Q658P3 488 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 C10orf99Q6UWK7 81 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 PTX4Q96A99 478 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 GALMQ96C23 342 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 EAF1Q96JC9 268 aaPredicted RBP10.55□□□□□ -0.72
LINC00399-201ENST00000439008 ZNF251Q9BRH9 671 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 ABHD14AQ9BUJ0 271 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 PRSS22Q9GZN4 317 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 C12orf4Q9NQ89 552 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 PLSCR3Q9NRY6 295 aa10.55□□□□□ -0.72
LINC00399-201ENST00000439008 ZNF230Q9UIE0 474 aaPredicted RBP10.55□□□□□ -0.72
LINC00399-201ENST00000439008 PLXNB1O43157 2135 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 LANCL1O43813 399 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 LPLP06858 475 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 FCGR3AP08637 254 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 RPS19P39019 145 aaKnown RBP10.54□□□□□ -0.72
LINC00399-201ENST00000439008 LY6G6FQ5SQ64 297 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 C11orf88Q6PI97 169 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 C16orf82Q7Z2V1 217 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 LYG1Q8N1E2 194 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 C5orf56Q8N8D9 126 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 RITA1Q96K30 269 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 AGMATQ9BSE5 352 aa10.54□□□□□ -0.72
LINC00399-201ENST00000439008 MRPL20Q9BYC9 149 aaKnown RBP10.54□□□□□ -0.72
LINC00399-201ENST00000439008 NAA50Q9GZZ1 169 aaKnown RBP10.54□□□□□ -0.72
LINC00399-201ENST00000439008 RIMS4Q9H426 269 aaPredicted RBP10.54□□□□□ -0.72
LINC00399-201ENST00000439008 SAA2-SAA4A0A096LPE2 208 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 LINC01548A6NM66 108 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 ADARB2-AS1A8MUL3 147 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 AIREO43918 545 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 TSPAN15O95858 294 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 FAM106CPP0CH98 169 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 SAA2P0DJI9 122 aaPredicted RBP10.53□□□□□ -0.72
LINC00399-201ENST00000439008 CD28P10747 220 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 TMEM11P17152 192 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 ARHGDIBP52566 201 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 F2RL1P55085 397 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 LINC00205P59089 165 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 HES1Q14469 280 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 CDNFQ49AH0 187 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 RPL39P5Q59GN2 51 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 IGSF11Q5DX21 431 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 TCTEX1D4Q5JR98 221 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 IDNKQ5T6J7 187 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 TGIF2LXQ8IUE1 241 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 IZUMO1Q8IYV9 350 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 OR13F1Q8NGS4 319 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 ABHD14BQ96IU4 210 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 NABP2Q9BQ15 211 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 FUNDC2Q9BWH2 189 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 C11orf54Q9H0W9 315 aaPredicted RBP10.53□□□□□ -0.72
LINC00399-201ENST00000439008 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 ABRACLQ9P1F3 81 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 SLC23A1Q9UHI7 598 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 MOB4Q9Y3A3 225 aa10.53□□□□□ -0.72
LINC00399-201ENST00000439008 TRDCB7Z8K6 153 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 SSX5O60225 188 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 GSTT2P0CG29 244 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 GSTT2BP0CG30 244 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 CD1BP29016 333 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 CEACAM6P40199 344 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 LSAMPQ13449 338 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 ZNF260Q3ZCT1 412 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 ZNF833PQ6ZTB9 187 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 Q8N9W7 124 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 NUDCD2Q8WVJ2 157 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 C5orf30Q96GV9 206 aa10.52□□□□□ -0.73
LINC00399-201ENST00000439008 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00399-201ENST00000439008 RHBDL2Q9NX52 303 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms