RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CA13Q8N1Q1 262 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 ARRDC1Q8N5I2 433 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 TBC1D19Q8N5T2 526 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 C11orf72Q8NBR9 251 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 NECAP1Q8NC96 275 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR4K2Q8NGD2 314 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR6Q1Q8NGQ2 317 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR52P1PQ8NH57 321 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR10D3Q8NH80 312 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 CIRBP-AS1Q8TBR5 109 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF721Q8TF20 911 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 YIPF5Q969M3 257 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 RNF145Q96MT1 663 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 TRIB3Q96RU7 358 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 DOK1Q99704 481 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 RNF5Q99942 180 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 LLPHQ9BRT6 129 aaKnown RBP1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 SNRNP25Q9BV90 132 aaKnown RBP1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 ANKRD60Q9BZ19 345 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 TMEM27Q9HBJ8 222 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 C20orf96Q9NUD7 363 aaPredicted RBP1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 VPREB3Q9UKI3 123 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 KLK5Q9Y337 293 aaPredicted RBP1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF337Q9Y3M9 751 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 SCN3AQ9NY46 2000 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 DNAH3Q8TD57 4116 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 MUC2Q02817 5179 aa1.82□□□□□ -2.12
HMGB3P12-201ENST00000438745 A0A0J9YXV3 536 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 KBTBD11-OT1A0A1B0GTJ5 212 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 SERTM2A0A1B0GWG4 89 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 H0YJW9 148 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 TRAPPC2LH3BP13 241 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 DNASE2O00115 360 aaPredicted RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 BPY2O14599 106 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 NIPSNAP2O75323 286 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 SEMA3DO95025 777 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 ETHE1O95571 254 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 FGFR1OPO95684 399 aaKnown RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 HBE1P02100 147 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF688P0C7X2 276 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF14P17017 642 aaPredicted RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 GSTM3P21266 225 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CNTFRP26992 372 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 TALDO1P37837 337 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 COILP38432 576 aaPredicted RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 DSCR4P56555 118 aaPredicted RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 RAB38P57729 211 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 RAB25P57735 213 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 BTN3A2P78410 334 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CRADDP78560 199 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 PRR3P79522 188 aaKnown RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CCSMST1Q4G0I0 132 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 HBMQ6B0K9 141 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CLEC6AQ6EIG7 209 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 DCUN1D2Q6PH85 259 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CCDC121Q6ZUS5 278 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 SLC16A13Q7RTY0 426 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 GALNT10Q86SR1 603 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF101Q8IZC7 436 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 TMEM256Q8N2U0 113 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR51D1Q8NGF3 324 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR5M1Q8NGP8 315 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 OR52E5Q8NH55 327 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 DOK4Q8TEW6 326 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 RMI2Q96E14 147 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 NRBF2Q96F24 287 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 MCEEQ96PE7 176 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 RNF157Q96PX1 679 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 TM2D3Q9BRN9 247 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 UQCC2Q9BRT2 126 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF649Q9BS31 505 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 SLIRPQ9GZT3 109 aaKnown RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CLN8Q9UBY8 286 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 RCL1Q9Y2P8 373 aaKnown RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 CAB39Q9Y376 341 aaPredicted RBP1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 ARL5AQ9Y689 179 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 MED12LQ86YW9 2145 aa1.81□□□□□ -2.12
HMGB3P12-201ENST00000438745 FLG2Q5D862 2391 aaPredicted RBP1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 PLECQ15149 4684 aaKnown RBP1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 KCNE1BA0A087WTH5 132 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 IGHV1-69DA0A0B4J2H0 117 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 IGHV1-69-2A0A0G2JMI3 117 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 TCRBV4S1A1TA0A5B7 111 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 ZNF850A8MQ14 1090 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 RPL36A-HNRNPH2H7BZ11 118 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 H7C0C1 242 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 M0R3G1 203 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 KCNK1O00180 336 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 CCL22O00626 93 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 NME4O00746 187 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 MFSD11O43934 449 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 CTNSO60931 367 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 FCN3O75636 299 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 SLC22A5O76082 557 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 PAHP00439 452 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 OPN1SWP03999 348 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 IL4P05112 153 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 TPM2P07951 284 aa1.8□□□□□ -2.12
HMGB3P12-201ENST00000438745 KRT16P08779 473 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms