RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PLSCR2Q9NRY7 297 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 SLC35D1Q9NTN3 355 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 R4GN57 208 aa5.75□□□□□ -1.49
CSDE1-205ENST00000438362 LRRC30A6NM36 301 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 UCP1P25874 307 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 UBE2G1P62253 170 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 RHOBP62745 196 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 ERHP84090 104 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FBXW9Q5XUX1 488 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 PMS2CLQ68D20 193 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 ZNF343Q6P1L6 599 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 C16orf82Q7Z2V1 217 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 RNF144BQ7Z419 303 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 MDP1Q86V88 176 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 C17orf82Q86X59 251 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 CALHM1Q8IU99 346 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 LRRC29Q8WV35 223 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FAM103A1Q9BTL3 118 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 RPRMQ9NS64 109 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 IL36GQ9NZH8 169 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 CLN8Q9UBY8 286 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 TRGV10A0A0A0MS01 117 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 B4E171 279 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 SRSF10O75494 262 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 HRASP01112 189 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 SRP19P09132 144 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FAM157CP0CG43 387 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 TSPAN7P41732 249 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 KRTDAPP60985 99 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 B2MP61769 119 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 OR10G8Q8NGN5 311 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 MAFAQ8NHW3 353 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 POM121L2Q96KW2 1035 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 OR2J1Q9GZK6 312 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FZR1Q9UM11 496 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 COLCA2A8K830 154 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 M0R1B8 84 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 SCGB2A1O75556 95 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 MT-CO3P00414 261 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 GYPAP02724 150 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 ACAA1P09110 424 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 PGA5P0DJD9 388 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 COX5BP10606 129 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 MPLP40238 635 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FAM3BP58499 235 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 RANP62826 216 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 HABP2Q14520 560 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 RTN4RL2Q86UN3 420 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FGFRL1Q8N441 504 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 ZADH2Q8N4Q0 377 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 SLC25A40Q8TBP6 338 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 HSD17B10Q99714 261 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 GGACTQ9BVM4 153 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 GSN-AS1Q9NRJ2 163 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 CISD1Q9NZ45 108 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 DMRT1Q9Y5R6 373 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FCN1O00602 326 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 PDE6DO43924 150 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 CLN5O75503 358 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 OR5G3P0C626 314 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 FOSL1P15407 271 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 RPL29P47914 159 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 STARD6P59095 220 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 CSRP2Q16527 193 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 ALKBH6Q3KRA9 238 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 DHRS13Q6UX07 377 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 MYPOPQ86VE0 399 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 LSM10Q969L4 123 aaKnown RBP5.74□□□□□ -1.49
CSDE1-205ENST00000438362 MEGF10Q96KG7 1140 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 LRFN3Q9BTN0 628 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 PKIBQ9C010 78 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 PARD6AQ9NPB6 346 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 NAT8BQ9UHF3 227 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 SH3BGRL2Q9UJC5 107 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 SLC45A2Q9UMX9 530 aa5.74□□□□□ -1.49
CSDE1-205ENST00000438362 TRBV23-1A0A0A0MS06 115 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 LOC102723971A0A1B0GUV8 181 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 FAM90A26D6RGX4 464 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 OR2H2O95918 312 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 IGHV3-13P01766 116 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 IGHV3-7P01780 117 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TRGC1P0CF51 173 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CT45A6P0DMU7 189 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CT45A5P0DMU8 189 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CT45A7P0DMV0 189 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 RAB4AP20338 218 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 RAB7AP51149 207 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 SSTP61278 116 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 AESQ08117 197 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CT45A1Q5HYN5 189 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 LYG1Q8N1E2 194 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 SCCPDHQ8NBX0 429 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 CT45A3Q8NHU0 189 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 C18orf12Q96KH6 178 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 VAMP8Q9BV40 100 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 TTTY12Q9BZ98 90 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 SH2D2AQ9NP31 389 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 ESPL1Q14674 2120 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 LINC00587B1AMM8 73 aa5.73□□□□□ -1.49
CSDE1-205ENST00000438362 SPRY3O43610 288 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms