RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 PLPP3O14495 311 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 SYNGR1O43759 233 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 CXCL13O43927 109 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 PAQR9Q6ZVX9 377 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 ADAD2Q8NCV1 583 aaKnown RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 OR4X2Q8NGF9 303 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 SPSB4Q96A44 273 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 KIR2DL4Q99706 377 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 ZBP1Q9H171 429 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 COA4Q9NYJ1 87 aa10.13□□□□□ -0.79
PTCH1-209ENST00000437951 CARHSP1Q9Y2V2 147 aaKnown RBP10.13□□□□□ -0.79
PTCH1-209ENST00000437951 NDUFB4O95168 129 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 SRIP30626 198 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ATP5IP56385 69 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 OR2K2Q8NGT1 345 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ASB10Q8WXI3 467 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 PLCH1Q4KWH8 1693 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 HPRT1P00492 218 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 FAM78AQ5JUQ0 283 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 MRPL24Q96A35 216 aaKnown RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 EP300Q09472 2414 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 PRSS2P07478 247 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 DANCRP0C864 163 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 GABRG2P18507 467 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 HBBP68871 147 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 HIKESHIQ53FT3 197 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 C17orf47Q8NEP4 570 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 MRPL32Q9BYC8 188 aaKnown RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ANKRD10Q9NXR5 420 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 PXMP4Q9Y6I8 212 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ATRXP46100 2492 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 CACNA1GO43497 2377 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 RPS11P62280 158 aaKnown RBP eCLIP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 FOXC1Q12948 553 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 RTN4RL1Q86UN2 441 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ABHD14AQ9BUJ0 271 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 WNT5BQ9H1J7 359 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 RPS4XP62701 263 aaKnown RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 OR4D5Q8NGN0 318 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 RBKSQ9H477 322 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF430Q9H8G1 570 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ASB1Q9Y576 335 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 OR51B2Q9Y5P1 312 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM202A6NGA9 273 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 RPL36A-HNRNPH2H7BZ11 118 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 FCGR3AP08637 254 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 HOXD4P09016 255 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-209ENST00000437951 ZGLP1P0C6A0 271 aa10.12□□□□□ -0.79
PTCH1-209ENST00000437951 DNAJC25-GNG10A0A024R161 153 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 SLC23A3Q6PIS1 610 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 NDUFAF3Q9BU61 184 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 MRPS18AQ9NVS2 196 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TINAGQ9UJW2 476 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 DEFB108AA8MXU0 73 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 FFAR1O14842 300 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RCC1P18754 421 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RPS27P42677 84 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 GEMIN7Q9H840 131 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 THADAQ6YHU6 1953 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 LINC00614P0C842 121 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 DLX6P56179 175 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 SMIM14Q96QK8 99 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 MRM2Q9UI43 246 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 CYSLTR1Q9Y271 337 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TOGARAM1Q9Y4F4 1720 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 SPRY3O43610 288 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TNFSF15O95150 251 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TMEM50AO95807 157 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 SBK3P0C264 359 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TM4SF19Q96DZ7 209 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 F11RQ9Y624 299 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 A0A1W2PS18 150 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RBMY1A1P0DJD3 496 aaKnown RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 RBMY1CP0DJD4 496 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 HKR1P10072 659 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 DUSP2Q05923 314 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 OR8B12Q8NGG6 310 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 OR4C13Q8NGP0 309 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 HDHD3Q9BSH5 251 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TUBA4BQ9H853 241 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 BTAF1O14981 1849 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 MT-CO3P00414 261 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 LYZL2Q7Z4W2 148 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF441Q8N8Z8 693 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 POC1AQ8NBT0 407 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 TBC1D29Q9UFV1 150 aa10.11□□□□□ -0.79
PTCH1-209ENST00000437951 IGHV3-15A0A0B4J1V0 119 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 C7orf71A4D174 169 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 IGHV4-34P06331 123 aa10.1□□□□□ -0.79
PTCH1-209ENST00000437951 ZNF79Q15937 498 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms