RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 FBP1P09467 338 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 GNG10P50151 68 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 GNG3P63215 75 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 CISD2Q8N5K1 135 aaKnown RBP8.01□□□□□ -1.13
CUX1-206ENST00000437600 ZNF610Q8N9Z0 462 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 OR10J5Q8NHC4 309 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 FAM213BQ8TBF2 198 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 SARAFQ96BY9 339 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 C14orf79Q96F83 325 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 SUCNR1Q9BXA5 334 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 DKK4Q9UBT3 224 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 CARHSP1Q9Y2V2 147 aaKnown RBP8.01□□□□□ -1.13
CUX1-206ENST00000437600 ATP23Q9Y6H3 246 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 A0A1W2PPE3 182 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 TUSC2O75896 110 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 TSPAN15O95858 294 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 OR2H2O95918 312 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 OR13C7P0DN81 318 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 PPP1CCP36873 323 aaKnown RBP8.01□□□□□ -1.13
CUX1-206ENST00000437600 CAMLGP49069 296 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 SULT1A2P50226 295 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 TMPRSS3P57727 454 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 PPP1CBP62140 327 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 EWSR1Q01844 656 aaKnown RBP eCLIP8.01□□□□□ -1.132e-6■■■□□ 16.3
CUX1-206ENST00000437600 NRN1LQ496H8 165 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 ACSF3Q4G176 576 aaPredicted RBP8.01□□□□□ -1.13
CUX1-206ENST00000437600 OR2C3Q8N628 320 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 OR5C1Q8NGR4 320 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 OR51I2Q9H344 312 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 KCNS2Q9ULS6 477 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 CENPEQ02224 2701 aa8.01□□□□□ -1.13
CUX1-206ENST00000437600 A6NLC8 198 aa8□□□□□ -1.13
CUX1-206ENST00000437600 PSPNO60542 156 aa8□□□□□ -1.13
CUX1-206ENST00000437600 NXPH2O95156 264 aa8□□□□□ -1.13
CUX1-206ENST00000437600 AESQ08117 197 aa8□□□□□ -1.13
CUX1-206ENST00000437600 LY6DQ14210 128 aa8□□□□□ -1.13
CUX1-206ENST00000437600 PRAMEF6Q5VXH4 476 aa8□□□□□ -1.13
CUX1-206ENST00000437600 BTNL8Q6UX41 500 aa8□□□□□ -1.13
CUX1-206ENST00000437600 SEM1Q6ZVN7 128 aa8□□□□□ -1.13
CUX1-206ENST00000437600 RNASE11Q8TAA1 199 aaKnown RBP8□□□□□ -1.13
CUX1-206ENST00000437600 DCTN5Q9BTE1 182 aa8□□□□□ -1.13
CUX1-206ENST00000437600 RCC2Q9P258 522 aaKnown RBP8□□□□□ -1.13
CUX1-206ENST00000437600 IGHV3-43A0A0B4J1X8 118 aa8□□□□□ -1.13
CUX1-206ENST00000437600 COLCA2A8K830 154 aa8□□□□□ -1.13
CUX1-206ENST00000437600 UBE2CO00762 179 aa8□□□□□ -1.13
CUX1-206ENST00000437600 SS18L1O75177 396 aaPredicted RBP8□□□□□ -1.13
CUX1-206ENST00000437600 IGHV3-43DP0DP04 118 aa8□□□□□ -1.13
CUX1-206ENST00000437600 IAPPP10997 89 aa8□□□□□ -1.13
CUX1-206ENST00000437600 CEACAM6P40199 344 aa8□□□□□ -1.13
CUX1-206ENST00000437600 ECI1P42126 302 aa8□□□□□ -1.13
CUX1-206ENST00000437600 TGFBR3Q03167 851 aa8□□□□□ -1.13
CUX1-206ENST00000437600 ZNF573Q86YE8 665 aa8□□□□□ -1.13
CUX1-206ENST00000437600 OR4D5Q8NGN0 318 aa8□□□□□ -1.13
CUX1-206ENST00000437600 DTD1Q8TEA8 209 aa8□□□□□ -1.13
CUX1-206ENST00000437600 TREM2Q9NZC2 230 aa8□□□□□ -1.13
CUX1-206ENST00000437600 CHTOPQ9Y3Y2 248 aaKnown RBP8□□□□□ -1.13
CUX1-206ENST00000437600 AQP7O14520 342 aa8□□□□□ -1.13
CUX1-206ENST00000437600 LY86O95711 162 aa8□□□□□ -1.13
CUX1-206ENST00000437600 SNRNP70P08621 437 aaKnown RBP8□□□□□ -1.13
CUX1-206ENST00000437600 NDUFB7P17568 137 aa8□□□□□ -1.13
CUX1-206ENST00000437600 UCP2P55851 309 aa8□□□□□ -1.13
CUX1-206ENST00000437600 TMEM267Q0VDI3 215 aaPredicted RBP8□□□□□ -1.13
CUX1-206ENST00000437600 ODF3L1Q8IXM7 274 aa8□□□□□ -1.13
CUX1-206ENST00000437600 ZNF808Q8N4W9 903 aaPredicted RBP8□□□□□ -1.13
CUX1-206ENST00000437600 TMEM252Q8N6L7 170 aa8□□□□□ -1.13
CUX1-206ENST00000437600 CCDC71LQ8N9Z2 235 aa8□□□□□ -1.13
CUX1-206ENST00000437600 KDF1Q8NAX2 398 aaPredicted RBP8□□□□□ -1.13
CUX1-206ENST00000437600 PFDN5Q99471 154 aa8□□□□□ -1.13
CUX1-206ENST00000437600 SEC11CQ9BY50 192 aa8□□□□□ -1.13
CUX1-206ENST00000437600 CDH20Q9HBT6 801 aa8□□□□□ -1.13
CUX1-206ENST00000437600 DUSP13Q9UII6 198 aa8□□□□□ -1.13
CUX1-206ENST00000437600 METRNQ9UJH8 293 aa8□□□□□ -1.13
CUX1-206ENST00000437600 DMRT1Q9Y5R6 373 aa8□□□□□ -1.13
CUX1-206ENST00000437600 TAAR5O14804 337 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 SMPD2O60906 423 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 CDS2O95674 445 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 ZNF14P17017 642 aaPredicted RBP7.99□□□□□ -1.13
CUX1-206ENST00000437600 DYNLT3P51808 116 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 GABRA6Q16445 453 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 TBC1D28Q2M2D7 210 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 C10orf91Q5T1B1 145 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 VHLLQ6RSH7 139 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 Q6ZS92 163 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 Q6ZT83 130 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 SSX9Q7RTT3 188 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 CMTM1Q8IZ96 169 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 Q8NA96 180 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 OR2G3Q8NGZ4 309 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 KLF14Q8TD94 323 aaPredicted RBP7.99□□□□□ -1.13
CUX1-206ENST00000437600 CD300LFQ8TDQ1 290 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 BOD1Q96IK1 185 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 CLCC1Q96S66 551 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 TMED3Q9Y3Q3 217 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 GPR137BO60478 399 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 TNFSF13O75888 250 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 ARG1P05089 322 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 HEXAP06865 529 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 SERPINE2P07093 398 aa7.99□□□□□ -1.13
CUX1-206ENST00000437600 NQO2P16083 231 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms