RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FAM157AC9JC47 383 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 KRASP01116 189 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 STX12Q86Y82 276 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 ZCCHC24Q8N2G6 241 aaKnown RBP13.23□□□□□ -0.29
SCARF1-203ENST00000434376 SCCPDHQ8NBX0 429 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 POM121Q96HA1 1249 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 PRDM14Q9GZV8 571 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 DLL3Q9NYJ7 618 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 PLXNB1O43157 2135 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 TRAV24A0A0B4J272 114 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 E5RGE8 158 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 PHOX2AO14813 284 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 GATCO43716 136 aaKnown RBP13.23□□□□□ -0.29
SCARF1-203ENST00000434376 PSG7Q13046 419 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 RNPS1Q15287 305 aaKnown RBP13.23□□□□□ -0.29
SCARF1-203ENST00000434376 MDS2Q8NDY4 140 aa13.23□□□□□ -0.29
SCARF1-203ENST00000434376 CENPEQ02224 2701 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 ZNF729A6NN14 1252 aaPredicted RBP13.22□□□□□ -0.29
SCARF1-203ENST00000434376 RPL36A-HNRNPH2H7BZ11 118 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 CXCL1P09341 107 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 DANCRP0C864 163 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 BMP5P22003 454 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 OR3A1P47881 315 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 FGF12P61328 243 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 DAZAP2Q15038 168 aaPredicted RBP13.22□□□□□ -0.29
SCARF1-203ENST00000434376 AKR1C8PQ5T2L2 129 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 TMEM42Q69YG0 159 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 PLPPR1Q8TBJ4 325 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 LEAP2Q969E1 77 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 ZDHHC8Q9ULC8 765 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
SCARF1-203ENST00000434376 CEACAM6P40199 344 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 DLK1P80370 383 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 EIF3IQ13347 325 aaKnown RBP13.22□□□□□ -0.29
SCARF1-203ENST00000434376 OR8G2PQ6IF36 304 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 UNQ6494/PRO21346Q6UXR6 183 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 WDR86Q86TI4 376 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 CMTM1Q8IZ96 169 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 CYB561D1Q8N8Q1 229 aa13.22□□□□□ -0.29
SCARF1-203ENST00000434376 KIAA1324LA8MWY0 1029 aaPredicted RBP13.21□□□□□ -0.29
SCARF1-203ENST00000434376 OR2H2O95918 312 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 ALDH3B1P43353 468 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 CYB5R2Q6BCY4 276 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 OR2Z1Q8NG97 314 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 Q8WTZ3 238 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 EGLN1Q9GZT9 426 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 DMRT1Q9Y5R6 373 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 CSMD1Q96PZ7 3565 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 A0A0G2JRQ6 117 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 ZFP92A6NM28 416 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 M0R1B8 84 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 CHST1O43916 411 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
SCARF1-203ENST00000434376 ZNF883P0CG24 379 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 MPZP25189 248 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 EDDM3BP56851 147 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 ZNF429Q86V71 674 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 LRP11Q86VZ4 500 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 ZNF573Q86YE8 665 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 CCDC71LQ8N9Z2 235 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 OR5C1Q8NGR4 320 aa13.21□□□□□ -0.29
SCARF1-203ENST00000434376 SPRY3O43610 288 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 RAB11AP62491 216 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 OR52L2PQ8NGH6 319 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 OR1L1Q8NH94 360 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 NANOS1Q8WY41 292 aaKnown RBP13.21□□□□□ -0.3
SCARF1-203ENST00000434376 OR5P3Q8WZ94 311 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 SNX22Q96L94 193 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 PLEKHA2Q9HB19 425 aa13.21□□□□□ -0.3
SCARF1-203ENST00000434376 METTL15P1P0C7V9 234 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 BCL2L2Q92843 193 aaPredicted RBP13.2□□□□□ -0.3
SCARF1-203ENST00000434376 SSX3Q99909 188 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 POMT1Q9Y6A1 747 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 IGKV3D-15A0A087WSY6 115 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 PPIHO43447 177 aaKnown RBP13.2□□□□□ -0.3
SCARF1-203ENST00000434376 IL2RGP31785 369 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 RPL23AP62750 156 aaKnown RBP13.2□□□□□ -0.3
SCARF1-203ENST00000434376 MRPL49Q13405 166 aaKnown RBP13.2□□□□□ -0.3
SCARF1-203ENST00000434376 KLF14Q8TD94 323 aaPredicted RBP13.2□□□□□ -0.3
SCARF1-203ENST00000434376 MOB3AQ96BX8 217 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 C10orf35Q96D05 121 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 ABHD14BQ96IU4 210 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 UNKLQ9H9P5 680 aaKnown RBP13.2□□□□□ -0.3
SCARF1-203ENST00000434376 Q9N2K0 584 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
SCARF1-203ENST00000434376 A0A087X0M5 115 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 A0A1B0GX30 115 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 DTYMKP23919 212 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 CDX1P47902 265 aaPredicted RBP13.19□□□□□ -0.3
SCARF1-203ENST00000434376 MSI2Q96DH6 328 aaKnown RBP13.19□□□□□ -0.3
SCARF1-203ENST00000434376 TAAR6Q96RI8 345 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 HSF4Q9ULV5 492 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 IFITM10A6NMD0 228 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 PSPNO60542 156 aa13.19□□□□□ -0.3
SCARF1-203ENST00000434376 GAPDHP04406 335 aaKnown RBP13.19□□□□□ -0.3
SCARF1-203ENST00000434376 SELLP14151 372 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms