RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 MAP1LC3BQ9GZQ8 125 aa12.59□□□□□ -0.39
DDX56-205ENST00000433257 PTPRBP23467 1997 aa12.59□□□□□ -0.39
DDX56-205ENST00000433257 WDFY3Q8IZQ1 3526 aa12.59□□□□□ -0.39
DDX56-205ENST00000433257 A0A087X0M5 115 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 IGKV1D-13A0A0B4J2D9 117 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 A0A1B0GX30 115 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 KIAA1324LA8MWY0 1029 aaPredicted RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 SLC31A2O15432 143 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 HLA-HP01893 362 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 IGKV1-13P0DP09 117 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 CCKARP32238 428 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 ARR3P36575 388 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 SRP14P37108 136 aaKnown RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 HERPUD1Q15011 391 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 GGNQ86UU5 652 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 MRPL30Q8TCC3 161 aaKnown RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 ZNF845Q96IR2 970 aaPredicted RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 ADGRG7Q96K78 797 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 ALKBH3Q96Q83 286 aaPredicted RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 HIST1H2BLQ99880 126 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 SSX3Q99909 188 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 WDR61Q9GZS3 305 aaKnown RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 SLC39A9Q9NUM3 307 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 OCIAD1Q9NX40 245 aa12.58□□□□□ -0.4
DDX56-205ENST00000433257 TNRC6AQ8NDV7 1962 aaKnown RBP12.58□□□□□ -0.4
DDX56-205ENST00000433257 IGKV3D-15A0A087WSY6 115 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 CEBPZOSA8MTT3 80 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 PPP5D1E7EU14 171 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 PHOX2AO14813 284 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 TNFSF15O95150 251 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 CCL4P13236 92 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 MEF2BQ02080 365 aaPredicted RBP12.57□□□□□ -0.4
DDX56-205ENST00000433257 HNF4GQ14541 408 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 DAZAP2Q15038 168 aaPredicted RBP12.57□□□□□ -0.4
DDX56-205ENST00000433257 MSMO1Q15800 293 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 WDR25Q64LD2 544 aaPredicted RBP12.57□□□□□ -0.4
DDX56-205ENST00000433257 KCNIP4Q6PIL6 250 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 Q8IYB0 196 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 TCTEX1D1Q8N7M0 179 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 OR56B2PQ8NGI1 322 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 OR2Y1Q8NGV0 311 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 OR14J1Q9UGF5 321 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 PRSS50Q9UI38 385 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 CTXND1A0A1B0GTU2 59 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 B4E171 279 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 CXCL13O43927 109 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 ZNF737O75373 536 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 IL2RGP31785 369 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 FOLR3P41439 243 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 TSPAN7P41732 249 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 PDLIM4P50479 330 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 GAMTQ14353 236 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 RTP5Q14D33 572 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 BSXQ3C1V8 233 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 DCAF12Q5T6F0 453 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 PCSK4Q6UW60 755 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 SMIM7Q9BQ49 75 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 ZNF665Q9H7R5 613 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 CHODLQ9H9P2 273 aa12.57□□□□□ -0.4
DDX56-205ENST00000433257 ANKRD30BLA7E2S9 258 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 H7BYZ3 331 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.56□□□□□ -0.4
DDX56-205ENST00000433257 PFN1P07737 140 aaKnown RBP12.56□□□□□ -0.4
DDX56-205ENST00000433257 LCN15Q6UWW0 184 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 CISD2Q8N5K1 135 aaKnown RBP12.56□□□□□ -0.4
DDX56-205ENST00000433257 NAXEQ8NCW5 288 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 OR10D3Q8NH80 312 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 LHX4Q969G2 390 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 ZPBPQ9BS86 351 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 CACNG5Q9UF02 275 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 TP53TG5Q9Y2B4 290 aa12.56□□□□□ -0.4
DDX56-205ENST00000433257 J3QW42 95 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 MRPL33O75394 65 aaKnown RBP12.55□□□□□ -0.4
DDX56-205ENST00000433257 HRASP01112 189 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 TYMSP04818 313 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 UMODP07911 640 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 CD99P14209 185 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 GNG3P63215 75 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 LCN2P80188 198 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 TMEM267Q0VDI3 215 aaPredicted RBP12.55□□□□□ -0.4
DDX56-205ENST00000433257 OR4X1Q8NH49 305 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 TMEM170AQ8WVE7 144 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 TAF15Q92804 592 aaKnown RBP eCLIP12.55□□□□□ -0.4
DDX56-205ENST00000433257 TMEM18Q96B42 140 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 IMMP2LQ96T52 175 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 OR51I2Q9H344 312 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 COL27A1Q8IZC6 1860 aaPredicted RBP12.55□□□□□ -0.4
DDX56-205ENST00000433257 CACNA1AO00555 2505 aa12.55□□□□□ -0.4
DDX56-205ENST00000433257 IGKV1-6A0A0C4DH72 117 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 A0A1W2PNU3 283 aaPredicted RBP12.54□□□□□ -0.4
DDX56-205ENST00000433257 ST8SIA5O15466 376 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 SS18L1O75177 396 aaPredicted RBP12.54□□□□□ -0.4
DDX56-205ENST00000433257 SERPINA7P05543 415 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 PGA5P0DJD9 388 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 PSG2P11465 335 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 GALR1P47211 349 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 GPM6AP51674 278 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 PLP2Q04941 152 aa12.54□□□□□ -0.4
DDX56-205ENST00000433257 SLC38A11Q08AI6 406 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms