RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 FAM71F2Q6NXP2 309 aa11.75□□□□□ -0.53
NUP50-209ENST00000432340 MRPS24Q96EL2 167 aaKnown RBP11.75□□□□□ -0.53
NUP50-209ENST00000432340 WDR89Q96FK6 387 aaPredicted RBP11.75□□□□□ -0.53
NUP50-209ENST00000432340 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
NUP50-209ENST00000432340 METTL1Q9UBP6 276 aaKnown RBP11.75□□□□□ -0.53
NUP50-209ENST00000432340 FCN1O00602 326 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 OR2T7P0C7T2 308 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 FOLR2P14207 255 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 ATP6V1B2P21281 511 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 FXYD3Q14802 87 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 ZNF691Q5VV52 312 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 ZNF833PQ6ZTB9 187 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 TMEM179BQ7Z7N9 219 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 PRSS35Q8N3Z0 413 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 PRR18Q8N4B5 295 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 OR5T1Q8NG75 326 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 OR5D14Q8NGL3 314 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 TSNAXQ99598 290 aaKnown RBP11.74□□□□□ -0.53
NUP50-209ENST00000432340 TINAGL1Q9GZM7 467 aaPredicted RBP11.74□□□□□ -0.53
NUP50-209ENST00000432340 FGFR1OP2Q9NVK5 253 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 ADAM30Q9UKF2 790 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 ING4Q9UNL4 249 aa11.74□□□□□ -0.53
NUP50-209ENST00000432340 PKHD1P08F94 4074 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 HMGB1P1B2RPK0 211 aaPredicted RBP11.73□□□□□ -0.53
NUP50-209ENST00000432340 IGLL5B9A064 214 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 SPDEFO95238 335 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 FADS2O95864 444 aaKnown RBP11.73□□□□□ -0.53
NUP50-209ENST00000432340 CA2P00918 260 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 MT-ND4P03905 459 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 MED22Q15528 200 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 ZSCAN26Q16670 478 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 PIGYQ3MUY2 71 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 FAM98BQ52LJ0 330 aaKnown RBP11.73□□□□□ -0.53
NUP50-209ENST00000432340 VPS13DQ5THJ4 4388 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 NXNL2Q5VZ03 156 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 ZNF57Q68EA5 555 aaPredicted RBP11.73□□□□□ -0.53
NUP50-209ENST00000432340 NR2C2APQ86WQ0 139 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 SLC38A6Q8IZM9 456 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 OR13C3Q8NGS6 347 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 ASB9Q96DX5 294 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 CLCC1Q96S66 551 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 GPER1Q99527 375 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 ALG8Q9BVK2 526 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 JAM3Q9BX67 310 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 SPACA1Q9HBV2 294 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 PAK1IP1Q9NWT1 392 aaPredicted RBP11.73□□□□□ -0.53
NUP50-209ENST00000432340 JPT1Q9UK76 154 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 GAB2Q9UQC2 676 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 ST3GAL6Q9Y274 331 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
NUP50-209ENST00000432340 H7C2Y5 167 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 TUSC2O75896 110 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 HBZP02008 142 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
NUP50-209ENST00000432340 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
NUP50-209ENST00000432340 TRIM25Q14258 630 aaKnown RBP11.72□□□□□ -0.53
NUP50-209ENST00000432340 MPV17LQ2QL34 196 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 MORN2Q502X0 79 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 ATAD3CQ5T2N8 411 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 FAM131AQ6UXB0 335 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 ZNF497Q6ZNH5 498 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 KCTD20Q7Z5Y7 419 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 ZNF554Q86TJ5 538 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 ZNF575Q86XF7 245 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 GID4Q8IVV7 300 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 CENPSQ8N2Z9 138 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 TNFAIP8L1Q8WVP5 186 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 ARL8BQ9NVJ2 186 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 KCNIP1Q9NZI2 227 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 PIPOXQ9P0Z9 390 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
NUP50-209ENST00000432340 C2orf70A6NJV1 201 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 RTL8CO15255 209 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 SULT1B1O43704 296 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 HTR3BO95264 441 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 TRBV12-3P01733 135 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 ANXA8P13928 327 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 TM4SF20Q53R12 229 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 SYT6Q5T7P8 510 aaPredicted RBP11.71□□□□□ -0.53
NUP50-209ENST00000432340 SERPINA12Q8IW75 414 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 Q8N1X5 172 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 OR2AK2Q8NG84 335 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 TBX5Q99593 518 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 FAM192AQ9GZU8 254 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.53
NUP50-209ENST00000432340 GNG8Q9UK08 70 aa11.71□□□□□ -0.53
NUP50-209ENST00000432340 TRAV25A0A0B4J276 109 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 A0A1W2PQL4 384 aaPredicted RBP11.7□□□□□ -0.54
NUP50-209ENST00000432340 CA11O75493 328 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 FAM107AO95990 144 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 ATP6V1E1P36543 226 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 LY6G6FQ5SQ64 297 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 TMEM236Q5W0B7 351 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 ODF3L1Q8IXM7 274 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 TMEM61Q8N0U2 210 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 OR1L6Q8NGR2 347 aa11.7□□□□□ -0.54
NUP50-209ENST00000432340 OR2G2Q8NGZ5 317 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms