RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 LRP5LA4QPB2 252 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 PROB1E7EW31 1015 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 HEXAP06865 529 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 EWSR1Q01844 656 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLDN4-202ENST00000431918 DHRS11Q6UWP2 260 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 DBX2Q6ZNG2 339 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 WFDC8Q8IUA0 241 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 ZNF709Q8N972 641 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 C9orf106Q8NAJ2 232 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 ADAMTS17Q8TE56 1095 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 TMEM222Q9H0R3 208 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 H2AFB1P0C5Y9 115 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 IRF2P14316 349 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 HOXA4Q00056 320 aaPredicted RBP9.72□□□□□ -0.85
CLDN4-202ENST00000431918 PSG7Q13046 419 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 IL13RA2Q14627 380 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 ZNF674Q2M3X9 581 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 NRN1LQ496H8 165 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 INO80CQ6PI98 192 aaPredicted RBP9.72□□□□□ -0.85
CLDN4-202ENST00000431918 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 PARD6AQ9NPB6 346 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 MED12LQ86YW9 2145 aa9.72□□□□□ -0.85
CLDN4-202ENST00000431918 SPINT2O43291 252 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 CD82P27701 267 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 MPV17P39210 176 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 DYNLT3P51808 116 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 BPIFB3P59826 476 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 RUNX1Q01196 453 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 FOXF2Q12947 444 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 FAM24BQ8N5W8 94 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 C15orf54Q8N8G6 183 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 MISP3Q96FF7 219 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 GLRX2Q9NS18 164 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 C19orf12Q9NSK7 152 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 IL36GQ9NZH8 169 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 PSG11Q9UQ72 335 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 ZFP92A6NM28 416 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 SMPD2O60906 423 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 MUC1P15941 1255 aaPredicted RBP9.71□□□□□ -0.85
CLDN4-202ENST00000431918 NAAAQ02083 359 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 SMIM21Q3B7S5 101 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 SH3BGRL3Q9H299 93 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 PSENENQ9NZ42 101 aa9.71□□□□□ -0.85
CLDN4-202ENST00000431918 IGHV3OR15-7A0A075B7D8 119 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 A0A1W2PPE3 182 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 PPP1R2P9O14990 202 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 SOHLH1Q5JUK2 328 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 OR5T1Q8NG75 326 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 LIN7CQ9NUP9 197 aaKnown RBP9.71□□□□□ -0.86
CLDN4-202ENST00000431918 USF3Q68DE3 2245 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 CEP295Q9C0D2 2601 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 EXPH5Q8NEV8 1989 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 RNF212BA8MTL3 300 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 F2RP25116 425 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 NKX6-1P78426 367 aaPredicted RBP9.71□□□□□ -0.86
CLDN4-202ENST00000431918 SRSF3P84103 164 aaKnown RBP9.71□□□□□ -0.86
CLDN4-202ENST00000431918 MSMO1Q15800 293 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 GUK1Q16774 197 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 BHLHA15Q7RTS1 189 aaPredicted RBP9.71□□□□□ -0.86
CLDN4-202ENST00000431918 OR1L1Q8NH94 360 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.86
CLDN4-202ENST00000431918 A0A1W2PPH5 198 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 PGLYRP1O75594 196 aaPredicted RBP9.7□□□□□ -0.86
CLDN4-202ENST00000431918 DAOP14920 347 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 PPP1CCP36873 323 aaKnown RBP9.7□□□□□ -0.86
CLDN4-202ENST00000431918 OR52L2PQ8NGH6 319 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 SPSB4Q96A44 273 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 SDSLQ96GA7 329 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 SIRT7Q9NRC8 400 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 POMT1Q9Y6A1 747 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 MKRN2OSH3BPM6 223 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 P2RY1P47900 373 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 PKIAP61925 76 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 IL34Q6ZMJ4 242 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 Q6ZT83 130 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 OR4A4PQ8NGN8 299 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 OR5H1A6NKK0 313 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 PRR33A8MZF0 331 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 HMGB3O15347 200 aaKnown RBP9.7□□□□□ -0.86
CLDN4-202ENST00000431918 WISP2O76076 250 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 CDS2O95674 445 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 GAMTQ14353 236 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 GALNT14Q96FL9 552 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 CXXC4Q9H2H0 198 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 RNF122Q9H9V4 155 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 RYDENQ9NUL5 291 aaKnown RBP9.7□□□□□ -0.86
CLDN4-202ENST00000431918 GOLT1BQ9Y3E0 138 aa9.7□□□□□ -0.86
CLDN4-202ENST00000431918 TRAV24A0A0B4J272 114 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 UMAD1C9J7I0 102 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 RPS2P15880 293 aaKnown RBP9.69□□□□□ -0.86
CLDN4-202ENST00000431918 HBG1P69891 147 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 HBG2P69892 147 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 MZT1Q08AG7 82 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 SELENOHQ8IZQ5 122 aaKnown RBP9.69□□□□□ -0.86
CLDN4-202ENST00000431918 SPRY4Q9C004 299 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 CPAMD8Q8IZJ3 1885 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 FAM90A10PA6NDY2 464 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
CLDN4-202ENST00000431918 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms