RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 POM121L2Q96KW2 1035 aa6.07□□□□□ -1.44
COL28A1-202ENST00000430711 WFIKKN1Q96NZ8 548 aa6.07□□□□□ -1.44
COL28A1-202ENST00000430711 PRDM14Q9GZV8 571 aa6.07□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF703Q9H7S9 590 aaPredicted RBP6.07□□□□□ -1.44
COL28A1-202ENST00000430711 KIAA1456Q9P272 454 aa6.07□□□□□ -1.44
COL28A1-202ENST00000430711 OR14J1Q9UGF5 321 aa6.07□□□□□ -1.44
COL28A1-202ENST00000430711 ATP23Q9Y6H3 246 aa6.07□□□□□ -1.44
COL28A1-202ENST00000430711 CLEC18AA5D8T8 446 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 WNT9BO14905 357 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 IL18BPO95998 194 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 TRGC1P0CF51 173 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 PGA5P0DJD9 388 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 EGR1P18146 543 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 GZMHP20718 246 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 VDAC1P21796 283 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 RAB1AP62820 205 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 RPL30P62888 115 aaKnown RBP6.06□□□□□ -1.44
COL28A1-202ENST00000430711 CEACAM21Q3KPI0 293 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 RNFT1Q5M7Z0 435 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 TET2Q6N021 2002 aaPredicted RBP6.06□□□□□ -1.44
COL28A1-202ENST00000430711 MRPL21Q7Z2W9 205 aaKnown RBP6.06□□□□□ -1.44
COL28A1-202ENST00000430711 CXorf67Q86X51 503 aaPredicted RBP6.06□□□□□ -1.44
COL28A1-202ENST00000430711 H1FOOQ8IZA3 346 aaPredicted RBP6.06□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF525Q8N782 197 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 TPRX1Q8N7U7 411 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 CLEC18CQ8NCF0 446 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 CA5BP1Q8WTZ4 195 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 ATP5SQ99766 215 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 OR51M1Q9H341 326 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 PRO1933Q9H354 126 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 AURKAIP1Q9NWT8 199 aaPredicted RBP6.06□□□□□ -1.44
COL28A1-202ENST00000430711 LRFN1Q9P244 771 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 AKAP13Q12802 2813 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 DCHS2Q6V1P9 2916 aa6.06□□□□□ -1.44
COL28A1-202ENST00000430711 EP300Q09472 2414 aaPredicted RBP6.05□□□□□ -1.44
COL28A1-202ENST00000430711 A0A1B0GUS0 222 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 A0A1B0GW64 132 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 FAM181BA6NEQ2 426 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 H0Y980 276 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 FKBP2P26885 142 aaKnown RBP6.05□□□□□ -1.44
COL28A1-202ENST00000430711 TAS2R30P59541 319 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 HMGN3Q15651 99 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 RIPPLY2Q5TAB7 128 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 Q6P435 159 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 ACSM6Q6P461 480 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF826PQ6ZT77 177 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 HIST3H2BBQ8N257 126 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 COMMD1Q8N668 190 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 LINC00469Q8N7U9 141 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 OR2M7Q8NG81 312 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 OR5D13Q8NGL4 314 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 SNX22Q96L94 193 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 PBDC1Q9BVG4 233 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 RBKSQ9H477 322 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 UBE2L5PA0A1B0GUS4 154 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 C9orf172C9J069 976 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 TRAPPC2LH3BP13 241 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 PSPNO60542 156 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 WDR1O75083 606 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 S100A8P05109 93 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 CD200P41217 278 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 CYB561P49447 251 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 RAB5CP51148 216 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 S100A12P80511 92 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 TFF3Q07654 80 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 GAMTQ14353 236 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF266Q14584 549 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 RNPS1Q15287 305 aaKnown RBP6.05□□□□□ -1.44
COL28A1-202ENST00000430711 GCSAMLQ5JQS6 135 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 OR8G2PQ6IF36 304 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 BTNL3Q6UXE8 466 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 DMRTC2Q8IXT2 367 aaPredicted RBP6.05□□□□□ -1.44
COL28A1-202ENST00000430711 RPP25LQ8N5L8 163 aaKnown RBP6.05□□□□□ -1.44
COL28A1-202ENST00000430711 OR4C12Q96R67 309 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 DCTN5Q9BTE1 182 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 TOLLIPQ9H0E2 274 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 IL17BQ9UHF5 180 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 OR2W1Q9Y3N9 320 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 SVILO95425 2214 aa6.05□□□□□ -1.44
COL28A1-202ENST00000430711 ZZEF1O43149 2961 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 ARFGEF3Q5TH69 2177 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 GJE1A6NN92 205 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 IGHV3-13P01766 116 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 IGHV3-7P01780 117 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 FABP4P15090 132 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 GPX4P36969 197 aaPredicted RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 CDX1P47902 265 aaPredicted RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 GLIPR1P48060 266 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 CD81P60033 236 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 HLA-DRB3P79483 266 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 PMP22Q01453 160 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 SPANXN5Q5MJ07 72 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 AKR1C8PQ5T2L2 129 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 Q6ZS49 121 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 C1QL4Q86Z23 238 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF808Q8N4W9 903 aaPredicted RBP6.04□□□□□ -1.44
COL28A1-202ENST00000430711 TMEM251Q8N6I4 163 aa6.04□□□□□ -1.44
COL28A1-202ENST00000430711 ZNF610Q8N9Z0 462 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms