RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RPS11P62280 158 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR10G4Q8NGN3 311 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR10G9Q8NGN4 311 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR10G7Q8NGN6 311 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 HIF1ANQ9NWT6 349 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 GLRXP35754 106 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 MOGAT2Q3SYC2 334 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 WDR31Q8NA23 367 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR1L6Q8NGR2 347 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR1L8Q8NGR8 309 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 INSIG2Q9Y5U4 225 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 LRRC3CA6NJW4 275 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 PSG2P11465 335 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 TMEM231Q9H6L2 316 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 GAR1Q9NY12 217 aaKnown RBP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF705FA8MVS1 300 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 TM4SF5O14894 197 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF705DP0CH99 300 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF705BP0CI00 300 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 RPL11P62913 178 aaKnown RBP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 KHDC1LQ5JSQ8 128 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 LYZL2Q7Z4W2 148 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 BVESQ8NE79 360 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 OR4F17Q8NGA8 305 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 IL19Q9UHD0 177 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 SCGB1D1O95968 90 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 CD8AP01732 235 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 ATP5IP56385 69 aaPredicted RBP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 ERVFC1-1P60608 527 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 EWSR1Q01844 656 aaKnown RBP eCLIP9.93□□□□□ -0.82
PTCH1-208ENST00000430669 UBAC2Q8NBM4 344 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 DTD1Q8TEA8 209 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 GUCD1Q96NT3 240 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 CLN8Q9UBY8 286 aa9.93□□□□□ -0.82
PTCH1-208ENST00000430669 NKX2-6A6NCS4 301 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 KLF7O75840 302 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-208ENST00000430669 CXorf1O96002 111 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 TMEM241Q24JQ0 296 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 ELF5Q9UKW6 265 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-208ENST00000430669 IGKV3D-15A0A087WSY6 115 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 TXNL1O43396 289 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 RFPL3SP0C7P2 107 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 GNG4P50150 75 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 ZNF90Q03938 601 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 ATG2AQ2TAZ0 1938 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 IGHV3-43A0A0B4J1X8 118 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 CLPSP04118 112 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 IGHV3-43DP0DP04 118 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 CLDN18P56856 261 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 CD300CQ08708 224 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 OVCH2Q7RTZ1 564 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 HDHD3Q9BSH5 251 aaPredicted RBP9.92□□□□□ -0.82
PTCH1-208ENST00000430669 C5orf66Q9H5L9 145 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 A0A0G2JK05 382 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 OR5H1A6NKK0 313 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 DVL1O14640 695 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 ASPHD2Q6ICH7 369 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 PRR7Q8TB68 274 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 HARBI1Q96MB7 349 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
PTCH1-208ENST00000430669 VAX2Q9UIW0 290 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 LGALS7P47929 136 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 TGIF2LYQ8IUE0 185 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 TGIF2LXQ8IUE1 241 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 GVINP1Q7Z2Y8 2422 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 RSRP1Q9BUV0 290 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 PLSCR2Q9NRY7 297 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 TECRQ9NZ01 308 aaKnown RBP9.92□□□□□ -0.82
PTCH1-208ENST00000430669 IL17BQ9UHF5 180 aa9.92□□□□□ -0.82
PTCH1-208ENST00000430669 CORTO00230 105 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 WDR61Q9GZS3 305 aaKnown RBP9.91□□□□□ -0.82
PTCH1-208ENST00000430669 FAM24AA6NFZ4 105 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 RTP5Q14D33 572 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 H1FOOQ8IZA3 346 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-208ENST00000430669 TEX29Q8N6K0 151 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 NPY1RP25929 384 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 KLRB1Q12918 225 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 C9orf152Q5JTZ5 239 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 DLL3Q9NYJ7 618 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 MIOXQ9UGB7 285 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 OPN1MWP04001 364 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 OPN1MW2P0DN77 364 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 OPN1MW3P0DN78 364 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 MPV17P39210 176 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 SRSF7Q16629 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
PTCH1-208ENST00000430669 IGSF11Q5DX21 431 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 TEPPQ6URK8 271 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 MRGPRGQ86SM5 289 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 SIRT7Q9NRC8 400 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 PQLC2LA1A4F0 135 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 CHEK1O14757 476 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 SSX2Q16385 188 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 OSGIN2Q9Y236 505 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 C9orf172C9J069 976 aa9.91□□□□□ -0.82
PTCH1-208ENST00000430669 KIAA0141Q14154 515 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-208ENST00000430669 RGP1Q92546 391 aaPredicted RBP9.91□□□□□ -0.82
PTCH1-208ENST00000430669 MRPL24Q96A35 216 aaKnown RBP9.91□□□□□ -0.82
PTCH1-208ENST00000430669 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms