RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ANKRD55Q3KP44 614 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 MORN2Q502X0 79 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 C4orf46Q504U0 113 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
SMC6-204ENST00000428868 ZNF554Q86TJ5 538 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 SPICQ8N5J4 248 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 ZNF439Q8NDP4 499 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 OR11H7Q8NGC8 314 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 OR8U1Q8NH10 309 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 CASTOR1Q8WTX7 329 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 ABHD14BQ96IU4 210 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 ZNF714Q96N38 554 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 TOLLIPQ9H0E2 274 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 OR2S2Q9NQN1 319 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 SLC2A9Q9NRM0 540 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 GFOD1Q9NXC2 390 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 OPN4Q9UHM6 478 aa7.29□□□□□ -1.24
SMC6-204ENST00000428868 RPUSD1Q9UJJ7 312 aaKnown RBP7.29□□□□□ -1.24
SMC6-204ENST00000428868 UBE2J1Q9Y385 318 aaPredicted RBP7.29□□□□□ -1.24
SMC6-204ENST00000428868 ZNF469Q96JG9 3925 aaPredicted RBP7.29□□□□□ -1.24
SMC6-204ENST00000428868 CELSR1Q9NYQ6 3014 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 CRYM-AS1A6NIL9 109 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 FAM157AC9JC47 383 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 CCSO14618 274 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 PRAF2O60831 178 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 HLA-AP01891 365 aaKnown RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 PAX1P15863 534 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 CXCL3P19876 107 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 GZMHP20718 246 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 VAMP1P23763 118 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 GNG10P50151 68 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 LUMP51884 338 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 PIGPP57054 158 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 RRAS2P62070 204 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 GNB2P62879 340 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 HTD2P86397 168 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 SURF2Q15527 256 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 SP6Q3SY56 376 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 METTL11BQ5VVY1 283 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 BTNL3Q6UXE8 466 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 LYG2Q86SG7 212 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 SLC38A6Q8IZM9 456 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 ZNF565Q8N9K5 539 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 LY6G5BQ8NDX9 201 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 C8orf46Q8TAG6 207 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 ZNF431Q8TF32 576 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 FAM168AQ92567 244 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 SSBP3Q9BWW4 388 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 SUCNR1Q9BXA5 334 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 GSX2Q9BZM3 304 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 ALX4Q9H161 411 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 OR2D2Q9H210 308 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 IFI27L2Q9H2X8 130 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 LINC00574Q9H8X3 128 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 TAS2R3Q9NYW6 316 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 GNG12Q9UBI6 72 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 JPT1Q9UK76 154 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 KCNS2Q9ULS6 477 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 PSG11Q9UQ72 335 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 C14orf166Q9Y224 244 aaKnown RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 MAP1AP78559 2803 aaPredicted RBP7.28□□□□□ -1.24
SMC6-204ENST00000428868 CSMD1Q96PZ7 3565 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.28□□□□□ -1.241e-21■■■■■ 39.4
SMC6-204ENST00000428868 ITPR2Q14571 2701 aa7.28□□□□□ -1.24
SMC6-204ENST00000428868 TRBV23-1A0A0A0MS06 115 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 PPIAL4CA0A0B4J2A2 164 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 HMX3A6NHT5 357 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 C17orf98A8MV24 154 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 BOLA2-SMG1P6H3BVE0 249 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 GPR31O00270 319 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 CREBL2O60519 120 aaPredicted RBP7.27□□□□□ -1.25
SMC6-204ENST00000428868 YPEL1O60688 119 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 PROP1O75360 226 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 SIX6O95475 246 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 SFT2D2O95562 160 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 OR5AC1P0C628 307 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 SULT1A3P0DMM9 295 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 SULT1A4P0DMN0 295 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 PPIAL4GP0DN37 164 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 ECI1P42126 302 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 TAS2R31P59538 309 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 RPL30P62888 115 aaKnown RBP7.27□□□□□ -1.25
SMC6-204ENST00000428868 LCN2P80188 198 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 PAX2Q02962 417 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 EIF4EBP1Q13541 118 aaPredicted RBP7.27□□□□□ -1.25
SMC6-204ENST00000428868 ABCA11PQ4W5N1 156 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 RPL39P5Q59GN2 51 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 CT45A1Q5HYN5 189 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 HEPN1Q6WQI6 88 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 NLRC3Q7RTR2 1065 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 TBC1D26Q86UD7 250 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 KRTAP1-3Q8IUG1 177 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 ODF3L1Q8IXM7 274 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 DRAM1Q8N682 238 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 Q8N7P7 452 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 UXS1Q8NBZ7 420 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 CT45A3Q8NHU0 189 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 LHFPL5Q8TAF8 219 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 ZFAND1Q8TCF1 268 aa7.27□□□□□ -1.25
SMC6-204ENST00000428868 ST6GAL2Q96JF0 529 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms