RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 ALKAL2Q6UX46 152 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 C1orf229Q6ZS94 237 aaPredicted RBP7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 C1orf87Q8N0U7 546 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 FAM168AQ92567 244 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 ARL11Q969Q4 196 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 Q9N2K0 584 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 SIRT7Q9NRC8 400 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 ANXA10Q9UJ72 324 aa7.85□□□□□ -1.15
HMGCLL1-206ENST00000428842 A8MXK9 166 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 HBZP02008 142 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF134P52741 427 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 ARF6P62330 175 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 MEF2DQ14814 521 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 CHRFAM7AQ494W8 412 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 SMUG1Q53HV7 270 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 LPCAT3Q6P1A2 487 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 TMED4Q7Z7H5 227 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 SLC51BQ86UW2 128 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 EIF4E3Q8N5X7 224 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR5M8Q8NGP6 311 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 MARCH1Q8TCQ1 289 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 SDSLQ96GA7 329 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 LINC00052Q96N35 136 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 OCSTAMPQ9BR26 566 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 MFFQ9GZY8 342 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 ANK3Q12955 4377 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 FN1P02751 2386 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR5H14A6NHG9 310 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 SMAD7O15105 426 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 FGF2P09038 288 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 WNT2P09544 360 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 HLA-GP17693 338 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 FCGR2CP31995 323 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 MDH2P40926 338 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 KLRD1Q13241 179 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 DHRS2Q13268 280 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 DIAPH2-AS1Q14236 149 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 CLEC12BQ2HXU8 276 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 C11orf88Q6PI97 169 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 FIP1L1Q6UN15 594 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 HSD17B13Q7Z5P4 300 aaPredicted RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 HOGA1Q86XE5 327 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 ADAD2Q8NCV1 583 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 OR1S1Q8NH92 325 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 COQ8AQ8NI60 647 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 NUDT16L1Q9BRJ7 211 aaKnown RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 ZNF2Q9BSG1 426 aaPredicted RBP7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 PFDN2Q9UHV9 154 aa7.84□□□□□ -1.15
HMGCLL1-206ENST00000428842 DISC1C4P0D8 188 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 OR5H8P0DN80 308 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 SLC25A4P12235 298 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZBTB25P24278 435 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 LMO4P61968 165 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 FGL1Q08830 312 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 C17orf58Q2M2W7 97 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 Q5PR19 223 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 BTNL3Q6UXE8 466 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 PEG10Q86TG7 708 aaKnown RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 SLC25A42Q86VD7 318 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 KRTAP1-3Q8IUG1 177 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF561Q8N587 486 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZDHHC22Q8N966 263 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 NEU4Q8WWR8 484 aaPredicted RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 ERGIC1Q969X5 290 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 ABHD14BQ96IU4 210 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 SNX22Q96L94 193 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 PRRT1Q99946 306 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 FAM234AQ9H0X4 552 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 PCDHB16Q9NRJ7 776 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 RASL12Q9NYN1 266 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 CLN8Q9UBY8 286 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 VSIG4Q9Y279 399 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 SESN1Q9Y6P5 492 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 TNCP24821 2201 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 A0A0D9SG52 128 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 KRBOX1C9JBD0 128 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 NDUFB3O43676 98 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 AADACP22760 399 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 UBA52P62987 128 aaKnown RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 RBM39Q14498 530 aaKnown RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 ZNF345Q14585 488 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 PHLDA2Q53GA4 152 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 RNASE10Q5GAN6 216 aaKnown RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 AADACL3Q5VUY0 350 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 WDR25Q64LD2 544 aaPredicted RBP7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 LIN54Q6MZP7 749 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 OR5AP2Q8NGF4 316 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 C10orf105Q8TEF2 133 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 C14orf79Q96F83 325 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 Q96MF0 132 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 SMR3AQ99954 134 aa7.83□□□□□ -1.16
HMGCLL1-206ENST00000428842 TMEM30CPA0ZSE6 113 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 MGST3O14880 152 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 ST8SIA5O15466 376 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 HSPA12AO43301 675 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 SCGNO76038 276 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 OR8U9P0C7N5 309 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 CD34P28906 385 aa7.82□□□□□ -1.16
HMGCLL1-206ENST00000428842 NUP62P37198 522 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms