RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 MTORP42345 2549 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF729A6NN14 1252 aaPredicted RBP6.18□□□□□ -1.42
CNOT4-206ENST00000428680 OR2J3O76001 311 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZFPL1O95159 310 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 EMP1P54849 157 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 FXYD3Q14802 87 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 LYPD4Q6UWN0 246 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ADGRL4Q9HBW9 690 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 J3QR06 171 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 BMPR1BO00238 502 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 CDC42EP2O14613 210 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZIC3O60481 467 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 SMIM10L1P0DMW3 83 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 FOXF2Q12947 444 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 LINC00596Q86U02 117 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 LRRTM1Q86UE6 522 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 LRRC75A-AS1Q8N1F1 130 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ARRDC1Q8N5I2 433 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 OR10J6PQ8NGY7 276 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 MARCH1Q8TCQ1 289 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 SFT2D1Q8WV19 159 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 MBD6Q96DN6 1003 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 SMIM10Q96HG1 83 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 PFDN5Q99471 154 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 CHST5Q9GZS9 411 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 DEPPQ9NTK1 212 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 MED9Q9NWA0 146 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 SPRR3Q9UBC9 169 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF107Q9UII5 783 aaPredicted RBP6.18□□□□□ -1.42
CNOT4-206ENST00000428680 CEPT1Q9Y6K0 416 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 IGKV3D-11A0A0A0MRZ8 115 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 SLC25A5P05141 298 aaKnown RBP6.18□□□□□ -1.42
CNOT4-206ENST00000428680 TRAPPC2P0DI81 140 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 TRAPPC2BP0DI82 140 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 CTRB1P17538 263 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 TSPOP30536 169 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 LHX2P50458 406 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 MMP16P51512 607 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF137PP52743 207 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 IGLV3-21P80748 117 aaPredicted RBP6.18□□□□□ -1.42
CNOT4-206ENST00000428680 IL13RA2Q14627 380 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 SPINK9Q5DT21 86 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 CTRB2Q6GPI1 263 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 OR4A47Q6IF82 309 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 FAM122CQ6P4D5 195 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF385DQ9H6B1 395 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF331Q9NQX6 463 aaPredicted RBP6.18□□□□□ -1.42
CNOT4-206ENST00000428680 UQCC1Q9NVA1 299 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 KMT2BQ9UMN6 2715 aaPredicted RBP6.18□□□□□ -1.42
CNOT4-206ENST00000428680 NPIPB11E5RHQ5 1161 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 AP4M1O00189 453 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 LILRA1O75019 489 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 FGF7P21781 194 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 MFAP4P55083 255 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 CLDN18P56856 261 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 PEA15Q15121 130 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF343Q6P1L6 599 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 PRSS45Q7RTY3 260 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 OR2G3Q8NGZ4 309 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 BPESC1Q9GZL8 116 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 GOLT1BQ9Y3E0 138 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 TMEM56-RWDD3S4R434 201 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 MYO9AB2RTY4 2548 aa6.18□□□□□ -1.42
CNOT4-206ENST00000428680 A0A0B4J2A0 478 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 GPX5O75715 221 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 RHBDL1O75783 438 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 SLC25A4P12235 298 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 RELQ04864 619 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 TMEM30BQ3MIR4 351 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 PHC2Q8IXK0 858 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 OR10AC1Q8NH08 325 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 RHOVQ96L33 236 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 FOXC2Q99958 501 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 SLC25A33Q9BSK2 321 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 SH2D2AQ9NP31 389 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 CACNG5Q9UF02 275 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 CD300AQ9UGN4 299 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 SHPKQ9UHJ6 478 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 KIAA1324LA8MWY0 1029 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 IGHV3-11P01762 117 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 S100A8P05109 93 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 WNT2P09544 360 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 PGA4P0DJD7 388 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 PGA3P0DJD8 388 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZP3P21754 424 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 NPPCP23582 126 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 NPY1RP25929 384 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 MST1P26927 711 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 HLA-DRB3P79483 266 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 HCP5Q6MZN7 132 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZNRF1Q8ND25 227 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 BVESQ8NE79 360 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 GNPNAT1Q96EK6 184 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ISG20L2Q9H9L3 353 aaKnown RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 ZNF230Q9UIE0 474 aaPredicted RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 LSM2Q9Y333 95 aaKnown RBP6.17□□□□□ -1.42
CNOT4-206ENST00000428680 BOLA1Q9Y3E2 137 aa6.17□□□□□ -1.42
CNOT4-206ENST00000428680 CSAG2Q9Y5P2 127 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms