RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 UBE2G2P60604 165 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 OR51E1Q8TCB6 317 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 WDR61Q9GZS3 305 aaKnown RBP4.39□□□□□ -1.71
RIF1-203ENST00000428287 CDC42EP3Q9UKI2 254 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 DOPEY1Q5JWR5 2465 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 TMEM238LA0A1B0GVL6 79 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 LRRC3CA6NJW4 275 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 ZNF814B7Z6K7 855 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 HSBP1L1C9JCN9 74 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 PDGFRLQ15198 375 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 C21orf62-AS1Q17RA5 79 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 C1orf189Q5VU69 101 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 OGFOD3Q6PK18 319 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 SFTPA1Q8IWL2 248 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 MRPL30Q8TCC3 161 aaKnown RBP4.39□□□□□ -1.71
RIF1-203ENST00000428287 GAL3ST4Q96RP7 486 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 MANBALQ9NQG1 85 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 HSPB7Q9UBY9 170 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 TMED7-TICAM2A0A0A6YYA0 188 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 E9PLN8 166 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 P0C879 139 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 CD1BP29016 333 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 TIMP3P35625 211 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 GJC3Q8NFK1 279 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 RNF186Q9NXI6 227 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 B3GALT1Q9Y5Z6 326 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 POLQO75417 2590 aa4.39□□□□□ -1.71
RIF1-203ENST00000428287 C1QTNF9BB2RNN3 333 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 HYPMO75409 117 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ARR3P36575 388 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TLE3Q04726 772 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 P2RY6Q15077 328 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TMEM41BQ5BJD5 291 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 C16orf82Q7Z2V1 217 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 WDYHV1Q96HA8 205 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 PRTFDC1Q9NRG1 225 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ATP23Q9Y6H3 246 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 A0A1W2PQU0 124 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 FAM166BA8MTA8 275 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 NPIPB11E5RHQ5 1161 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 RER1O15258 196 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 PHF1O43189 567 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 RBFOX2O43251 390 aaKnown RBP eCLIP4.38□□□□□ -1.718e-7■■□□□ 13.4
RIF1-203ENST00000428287 LILRA1O75019 489 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 PDGFBP01127 241 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 ANOS1P23352 680 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 F2RP25116 425 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ZNF787Q6DD87 383 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TCF24Q7RTU0 167 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OR5T1Q8NG75 326 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OR51T1Q8NGJ9 327 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 GP6Q9HCN6 339 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TAAR3PQ9P1P4 343 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ARL2-SNX15V9GYD0 113 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ZFP92A6NM28 416 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 VWC2Q2TAL6 325 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 PHLDA2Q53GA4 152 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 GAPTQ8N292 157 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OR4C12Q96R67 309 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 GPER1Q99527 375 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 HDHD3Q9BSH5 251 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 TRBV9A0A0B4J1U6 114 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 H0YJW9 148 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 WDR1O75083 606 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 KLF8O95600 359 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 LINC00869P0C866 280 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 KIR2DL1P43626 348 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 VAMP2P63027 116 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 NFATC4Q14934 902 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ATP6V1FQ16864 119 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 LRRC10Q5BKY1 277 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 CPEB3Q8NE35 698 aaKnown RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 OR5L1Q8NGL2 311 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OR11L1Q8NGX0 322 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 C11orf52Q96A22 123 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OR5B12Q96R08 314 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 HRASLS2Q9NWW9 162 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 FOXJ2Q9P0K8 574 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 SSSCA1O60232 199 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 RAMP3O60896 148 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 ADH1BP00325 375 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 MMP7P09237 267 aaPredicted RBP4.38□□□□□ -1.71
RIF1-203ENST00000428287 TDGF1P13385 188 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 PVRP15151 417 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OMGP23515 440 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 GJA4P35212 333 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TMPRSS3P57727 454 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 COX19Q49B96 90 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 C10orf128Q5T292 105 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 FAM57BQ71RH2 274 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 HAPLN4Q86UW8 402 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 CCL4L1Q8NHW4 92 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 MED29Q9NX70 200 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 OBP2AQ9NY56 170 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 C1RLQ9NZP8 487 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 C3orf85A0A1B0GTC6 90 aa4.38□□□□□ -1.71
RIF1-203ENST00000428287 TNFP01375 233 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms