RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 HMGN3Q15651 99 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 HSD17B12Q53GQ0 312 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 LY6G6FQ5SQ64 297 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 NRG4Q8WWG1 115 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 GALMQ96C23 342 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 RITA1Q96K30 269 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 GPR61Q9BZJ8 451 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 SCN3BQ9NY72 215 aa21.35■■□□□ 1.01
LMO1-202ENST00000428101 TMEM14DPA8MWL7 114 aa21.34■■□□□ 1.01
LMO1-202ENST00000428101 AQP4P55087 323 aa21.34■■□□□ 1.01
LMO1-202ENST00000428101 KCNG3Q8TAE7 436 aa21.34■■□□□ 1.01
LMO1-202ENST00000428101 NABP2Q9BQ15 211 aa21.34■■□□□ 1.01
LMO1-202ENST00000428101 MRPL20Q9BYC9 149 aaKnown RBP21.34■■□□□ 1.01
LMO1-202ENST00000428101 LRRC42Q9Y546 428 aa21.34■■□□□ 1.01
LMO1-202ENST00000428101 A0A0A6YYD4 124 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 CCL24O00175 119 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 RRP9O43818 475 aaKnown RBP21.33■■□□□ 1.01
LMO1-202ENST00000428101 IGF1P05019 195 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 ELANEP08246 267 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 OR3A3P47888 321 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 CXorf66Q5JRM2 361 aaPredicted RBP21.33■■□□□ 1.01
LMO1-202ENST00000428101 LIPKQ5VXJ0 399 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 ZNF833PQ6ZTB9 187 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 TMEM203Q969S6 136 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 MCRIP2Q9BUT9 160 aaKnown RBP21.33■■□□□ 1.01
LMO1-202ENST00000428101 ZNF580Q9UK33 172 aa21.33■■□□□ 1.01
LMO1-202ENST00000428101 NAPSAO96009 420 aa21.32■■□□□ 1
LMO1-202ENST00000428101 IGHG4P01861 327 aa21.32■■□□□ 1
LMO1-202ENST00000428101 SLC2A2P11168 524 aaPredicted RBP21.32■■□□□ 1
LMO1-202ENST00000428101 CDX1P47902 265 aaPredicted RBP21.32■■□□□ 1
LMO1-202ENST00000428101 MMDQ15546 238 aa21.32■■□□□ 1
LMO1-202ENST00000428101 ZNF880Q6PDB4 577 aa21.32■■□□□ 1
LMO1-202ENST00000428101 TMEM91Q6ZNR0 172 aa21.32■■□□□ 1
LMO1-202ENST00000428101 UFD1Q92890 307 aa21.32■■□□□ 1
LMO1-202ENST00000428101 GFI1Q99684 422 aa21.32■■□□□ 1
LMO1-202ENST00000428101 DUSP21Q9H596 190 aa21.32■■□□□ 1
LMO1-202ENST00000428101 ZNF107Q9UII5 783 aaPredicted RBP21.32■■□□□ 1
LMO1-202ENST00000428101 COL7A1Q02388 2944 aa21.31■■□□□ 1
LMO1-202ENST00000428101 RGS11O94810 467 aa21.31■■□□□ 1
LMO1-202ENST00000428101 BPNT1O95861 308 aa21.31■■□□□ 1
LMO1-202ENST00000428101 MYF6P23409 242 aa21.31■■□□□ 1
LMO1-202ENST00000428101 CNTFRP26992 372 aa21.31■■□□□ 1
LMO1-202ENST00000428101 DEFB136Q30KP8 78 aa21.31■■□□□ 1
LMO1-202ENST00000428101 SVOPQ8N4V2 548 aa21.31■■□□□ 1
LMO1-202ENST00000428101 DPF1Q92782 380 aa21.31■■□□□ 1
LMO1-202ENST00000428101 KCTD7Q96MP8 289 aa21.31■■□□□ 1
LMO1-202ENST00000428101 IFI27L2Q9H2X8 130 aa21.31■■□□□ 1
LMO1-202ENST00000428101 SAA2-SAA4A0A096LPE2 208 aa21.3■■□□□ 1
LMO1-202ENST00000428101 SAA2P0DJI9 122 aaPredicted RBP21.3■■□□□ 1
LMO1-202ENST00000428101 VDAC1P21796 283 aa21.3■■□□□ 1
LMO1-202ENST00000428101 BLVRBP30043 206 aaPredicted RBP21.3■■□□□ 1
LMO1-202ENST00000428101 ACTBP60709 375 aa21.3■■□□□ 1
LMO1-202ENST00000428101 TPBGQ13641 420 aa21.3■■□□□ 1
LMO1-202ENST00000428101 KIR2DS1Q14954 304 aa21.3■■□□□ 1
LMO1-202ENST00000428101 DEFB121Q5J5C9 76 aa21.3■■□□□ 1
LMO1-202ENST00000428101 OR2AK2Q8NG84 335 aa21.3■■□□□ 1
LMO1-202ENST00000428101 OR6M1Q8NGM8 313 aa21.3■■□□□ 1
LMO1-202ENST00000428101 LPAR5Q9H1C0 372 aa21.3■■□□□ 1
LMO1-202ENST00000428101 ABRACLQ9P1F3 81 aa21.3■■□□□ 1
LMO1-202ENST00000428101 TPRKBQ9Y3C4 175 aa21.3■■□□□ 1
LMO1-202ENST00000428101 DNAH9Q9NYC9 4486 aa21.29■■□□□ 1
LMO1-202ENST00000428101 PSMB8P28062 276 aa21.29■■□□□ 1
LMO1-202ENST00000428101 RPS25P62851 125 aaKnown RBP21.29■■□□□ 1
LMO1-202ENST00000428101 IL1F10Q8WWZ1 152 aa21.29■■□□□ 1
LMO1-202ENST00000428101 PLEKHJ1Q9NW61 149 aa21.29■■□□□ 1
LMO1-202ENST00000428101 ERICH4A6NGS2 130 aa21.28■■□□□ 1
LMO1-202ENST00000428101 OR8U1Q8NH10 309 aa21.28■■□□□ 1
LMO1-202ENST00000428101 ZNF251Q9BRH9 671 aa21.28■■□□□ 1
LMO1-202ENST00000428101 TRBV6-6A0A0A6YYG2 114 aa21.27■■□□□ 1
LMO1-202ENST00000428101 ST8SIA5O15466 376 aa21.27■■□□□ 1
LMO1-202ENST00000428101 SOCS1O15524 211 aa21.27■■□□□ 1
LMO1-202ENST00000428101 HSMCR30P0CW71 290 aa21.27■■□□□ 1
LMO1-202ENST00000428101 RAB25P57735 213 aa21.27■■□□□ 1
LMO1-202ENST00000428101 P2RY14Q15391 338 aa21.27■■□□□ 1
LMO1-202ENST00000428101 FAM89BQ8N5H3 189 aa21.27■■□□□ 1
LMO1-202ENST00000428101 ANKRD60Q9BZ19 345 aa21.27■■□□□ 1
LMO1-202ENST00000428101 PARP12Q9H0J9 701 aaKnown RBP21.27■■□□□ 1
LMO1-202ENST00000428101 CHMP1AQ9HD42 196 aaPredicted RBP21.27■■□□□ 1
LMO1-202ENST00000428101 ISYNA1Q9NPH2 558 aa21.27■■□□□ 1
LMO1-202ENST00000428101 STEAP1Q9UHE8 339 aa21.27■■□□□ 1
LMO1-202ENST00000428101 AK6Q9Y3D8 172 aaKnown RBP21.27■■□□□ 1
LMO1-202ENST00000428101 IGHV7-81A0A0B4J1V7 117 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 FOXI3A8MTJ6 420 aaPredicted RBP21.26■□□□□ 0.99
LMO1-202ENST00000428101 SLC17A2O00624 439 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 NBR2O15453 112 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 RGS10O43665 173 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 HLA-DRB1P01911 266 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 OR5H8P0DN80 308 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 PPIFP30405 207 aaKnown RBP21.26■□□□□ 0.99
LMO1-202ENST00000428101 FAM71F2Q6NXP2 309 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 NPBQ8NG41 125 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 SETD6Q8TBK2 473 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 MYOZ3Q8TDC0 251 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 CHCHD6Q9BRQ6 235 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 HDHD3Q9BSH5 251 aaPredicted RBP21.26■□□□□ 0.99
LMO1-202ENST00000428101 AK3Q9UIJ7 227 aa21.26■□□□□ 0.99
LMO1-202ENST00000428101 G3V318 75 aa21.25■□□□□ 0.99
LMO1-202ENST00000428101 ARSBP15848 533 aa21.25■□□□□ 0.99
LMO1-202ENST00000428101 CPEP16870 476 aa21.25■□□□□ 0.99
LMO1-202ENST00000428101 KIAA0141Q14154 515 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms