RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 FOXH1O75593 365 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 LYNX1P0DP58 116 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 MMP16P51512 607 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
TCOF1-204ENST00000427724 PNLIPRP3Q17RR3 467 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 MS4A18Q3C1V0 323 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 ZNF429Q86V71 674 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 TMUB1Q9BVT8 246 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 GP6Q9HCN6 339 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 RAB18Q9NP72 206 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 COA4Q9NYJ1 87 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 GPR137BO60478 399 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 IGHV1-2P23083 117 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 CALCRP30988 508 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 NKX2-1P43699 371 aaPredicted RBP9.15□□□□□ -0.94
TCOF1-204ENST00000427724 TMEM33P57088 247 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 LINC00114Q6XXX2 140 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 RCC2Q9P258 522 aaKnown RBP9.15□□□□□ -0.94
TCOF1-204ENST00000427724 INSIG2Q9Y5U4 225 aa9.15□□□□□ -0.94
TCOF1-204ENST00000427724 A0A0G2JNJ9 132 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 SERPINE3A8MV23 424 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 SOX15O60248 233 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 PDLIM3Q53GG5 364 aaPredicted RBP9.15□□□□□ -0.95
TCOF1-204ENST00000427724 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.95
TCOF1-204ENST00000427724 OR13D1Q8NGV5 346 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 RPS4Y2Q8TD47 263 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 PACRGQ96M98 296 aaPredicted RBP9.15□□□□□ -0.95
TCOF1-204ENST00000427724 WFIKKN1Q96NZ8 548 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 GPR61Q9BZJ8 451 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 Q9UFV3 132 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 ZDHHC8Q9ULC8 765 aa9.15□□□□□ -0.95
TCOF1-204ENST00000427724 TIMM8BQ9Y5J9 83 aaPredicted RBP9.15□□□□□ -0.95
TCOF1-204ENST00000427724 K7EM74 188 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 MDKP21741 143 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-204ENST00000427724 ECI1P42126 302 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 RPL19P84098 196 aaKnown RBP9.14□□□□□ -0.95
TCOF1-204ENST00000427724 ROM1Q03395 351 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 DHRS11Q6UWP2 260 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 TMEM37Q8WXS4 190 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 RBMXL1Q96E39 390 aaKnown RBP9.14□□□□□ -0.95
TCOF1-204ENST00000427724 SEMA5BQ9P283 1151 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 IL19Q9UHD0 177 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 AUP1Q9Y679 476 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 A0A1W2PPQ1 181 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 ZNF727A8MUV8 499 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 J3QT63 122 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 HBE1P02100 147 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 SLC25A4P12235 298 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 SURF2Q15527 256 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-204ENST00000427724 TMEM41BQ5BJD5 291 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 COMMD1Q8N668 190 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 POC1BQ8TC44 478 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 AMMECR1Q9Y4X0 333 aaPredicted RBP9.14□□□□□ -0.95
TCOF1-204ENST00000427724 HEATR5AQ86XA9 2040 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 E5RGE8 158 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 H3BP45 60 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 TIMP3P35625 211 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 MDS2Q8NDY4 140 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 HES4Q9HCC6 221 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 NSG2Q9Y328 171 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 WSB1Q9Y6I7 421 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 A8MXE2 369 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 H7BYZ3 331 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 C1QL1O75973 258 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 DDTP30046 118 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 LPAR6P43657 344 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 H3F3AP84243 136 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 ZP4Q12836 540 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 VMA21Q3ZAQ7 101 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 ZNF260Q3ZCT1 412 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 OR8G2PQ6IF36 304 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 LURAP1LQ8IV03 231 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 C1orf174Q8IYL3 243 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 TVP23CQ96ET8 276 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 FAM210BQ96KR6 192 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 RASL11BQ9BPW5 248 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 C1RLQ9NZP8 487 aa9.14□□□□□ -0.95
TCOF1-204ENST00000427724 HAND1O96004 215 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 PGA4P0DJD7 388 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 PGA3P0DJD8 388 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 ZBTB25P24278 435 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 PKIAP61925 76 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 ZNF385CQ66K41 422 aaPredicted RBP9.13□□□□□ -0.95
TCOF1-204ENST00000427724 ETFRF1Q6IPR1 90 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 TMEM230Q96A57 120 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 PLEKHA2Q9HB19 425 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 OR5AC2Q9NZP5 309 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 STRAPQ9Y3F4 350 aaKnown RBP9.13□□□□□ -0.95
TCOF1-204ENST00000427724 FRMPD3Q5JV73 1810 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 FANCMQ8IYD8 2048 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 CRYM-AS1A6NIL9 109 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
TCOF1-204ENST00000427724 GEMIN2O14893 280 aaKnown RBP9.13□□□□□ -0.95
TCOF1-204ENST00000427724 SSSCA1O60232 199 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 REG1BP48304 166 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 ZNF66Q6ZN08 573 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 DBX2Q6ZNG2 339 aa9.13□□□□□ -0.95
TCOF1-204ENST00000427724 DOK5Q9P104 306 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms