RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 CCL8P80075 99 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 MEF2CQ06413 473 aaPredicted RBP7.9□□□□□ -1.14
HMGB4-201ENST00000425537 IL15RAQ13261 267 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 RAB32Q13637 225 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 C4orf17Q53FE4 359 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 GPR157Q5UAW9 335 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 EIF5AL1Q6IS14 154 aaKnown RBP7.9□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF66Q6ZN08 573 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 ZNF788Q6ZQV5 615 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 OR8H3Q8N146 312 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 SLC35G3Q8N808 338 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 OR8U1Q8NH10 309 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 OR1L1Q8NH94 360 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 RNASE11Q8TAA1 199 aaKnown RBP7.9□□□□□ -1.14
HMGB4-201ENST00000425537 CD300LFQ8TDQ1 290 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 SCARB1Q8WTV0 552 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 RAB39BQ96DA2 213 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 AQP10Q96PS8 301 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 TP53RKQ96S44 253 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 SHARPINQ9H0F6 387 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 HEXA-AS1Q9H8Q6 139 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 OR2S2Q9NQN1 319 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 CISD1Q9NZ45 108 aaKnown RBP7.9□□□□□ -1.14
HMGB4-201ENST00000425537 NSG2Q9Y328 171 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 PPIAL4AQ9Y536 164 aa7.9□□□□□ -1.14
HMGB4-201ENST00000425537 IGHV3OR15-7A0A075B7D8 119 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 TRAV39A0A0B4J263 110 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 A0A1B0GU03 582 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 hADV38S2A0JD32 116 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 A1L4Q6 167 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 CLEC18AA5D8T8 446 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 ZNF729A6NN14 1252 aaPredicted RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 F5H0A9 414 aaPredicted RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 C3orf80F5H4A9 247 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 SIGLEC5O15389 551 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 YPEL1O60688 119 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 ZG16O60844 167 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 DEDDO75618 318 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 MMP9P14780 707 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 EXOSC2Q13868 293 aaKnown RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 CDSNQ15517 529 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 ZNF672Q499Z4 452 aaPredicted RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 CLLU1Q5K131 121 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 LYZL2Q7Z4W2 148 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 FAM219AQ8IW50 185 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 SELENOHQ8IZQ5 122 aaKnown RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 FAM71E2Q8N5Q1 922 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 CLEC18CQ8NCF0 446 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 OR10A7Q8NGE5 316 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 OR13A1Q8NGR1 328 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 LRRC20Q8TCA0 184 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 LSM10Q969L4 123 aaKnown RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 RRNAD1Q96FB5 475 aaKnown RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 YPEL2Q96QA6 119 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 HSD17B10Q99714 261 aaKnown RBP7.89□□□□□ -1.15
HMGB4-201ENST00000425537 RNF126Q9BV68 326 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 GAL3ST2Q9H3Q3 398 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 TAS2R3Q9NYW6 316 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 PRR13Q9NZ81 148 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 GNG12Q9UBI6 72 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 POMT1Q9Y6A1 747 aa7.89□□□□□ -1.15
HMGB4-201ENST00000425537 NBASA2RRP1 2371 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 IGHV1-69-2A0A0G2JMI3 117 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 RNF222A6NCQ9 220 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 C15orf65H3BRN8 121 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 TMEM178BH3BS89 294 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 K7EPK0 472 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 F2RL2O00254 374 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 WRBO00258 174 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 CLDN14O95500 239 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 FSTL3O95633 263 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 SCGB1D2O95969 90 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 CYB5R3P00387 301 aaPredicted RBP7.88□□□□□ -1.15
HMGB4-201ENST00000425537 TPT1P13693 172 aaKnown RBP7.88□□□□□ -1.15
HMGB4-201ENST00000425537 KIR2DS2P43631 304 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 NKX2-1P43699 371 aaPredicted RBP7.88□□□□□ -1.15
HMGB4-201ENST00000425537 P2RY1P47900 373 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 PPOXP50336 477 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 VAMP2P63027 116 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 HFEQ30201 348 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 LRRC10Q5BKY1 277 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 HIST2H2BCQ6DN03 193 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 DMRTC2Q8IXT2 367 aaPredicted RBP7.88□□□□□ -1.15
HMGB4-201ENST00000425537 MUC15Q8N387 334 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 DRAM1Q8N682 238 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.88□□□□□ -1.15
HMGB4-201ENST00000425537 OR52M1Q8NGK5 317 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 OR51H1Q8NH63 302 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 OR1S1Q8NH92 325 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 LINC01560Q8TB33 94 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 CORO2AQ92828 525 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 GAFA1Q96PS6 74 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 ZNF471Q9BX82 626 aaPredicted RBP7.88□□□□□ -1.15
HMGB4-201ENST00000425537 GSX2Q9BZM3 304 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 SLC25A31Q9H0C2 315 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 OR2D2Q9H210 308 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 TMEM106BQ9NUM4 274 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 CALYQ9NYX4 217 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 CACFD1Q9UGQ2 172 aa7.88□□□□□ -1.15
HMGB4-201ENST00000425537 LSM5Q9Y4Y9 91 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms