RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 ZNF318Q5VUA4 2279 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 TRBV20-1A0A075B6N2 111 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 CDC42EP2O14613 210 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 SRIP30626 198 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 SYS1Q8N2H4 156 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 RBPJLQ9UBG7 517 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 ACTL10Q5JWF8 245 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 EMG1Q92979 244 aaKnown RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 FAM173AQ9BQD7 235 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 RTBDNQ9BSG5 229 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 SDF2L1Q9HCN8 221 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 FAM169BQ8N8A8 192 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 OR8A1Q8NGG7 326 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 LRRC61Q9BV99 259 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 MS4A5Q9H3V2 200 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 CLEC1BQ9P126 229 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 ASXL3Q9C0F0 2248 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 FAM90A27PA6NNH2 459 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 NANOS3P60323 173 aaKnown RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 GUCD1Q96NT3 240 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 ULBP2Q9BZM5 246 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM38BQ9NVV0 291 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 RALGAPA1Q6GYQ0 2036 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 H3BP45 60 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 DUX1O43812 170 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 FASLGP48023 281 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 FAM71E1Q6IPT2 247 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 TM4SF18Q96CE8 201 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 TSC2P49815 1807 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 EWSR1Q01844 656 aaKnown RBP eCLIP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 MEF2BQ02080 365 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 ATP5G2Q06055 141 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 TMEM116Q8NCL8 245 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 NPEPL1Q8NDH3 523 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF740Q8NDX6 193 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 PRSS16Q9NQE7 514 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 PSMB11A5LHX3 300 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 IHHQ14623 411 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF611Q8N823 705 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 MRGPRFQ96AM1 343 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 WDR76Q9H967 626 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 HSBP1O75506 76 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 MAS1LP35410 378 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 LTBRP36941 435 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 CYB561P49447 251 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 LYPD6BQ8NI32 183 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 PHF7Q9BWX1 381 aaPredicted RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 RPS21P63220 83 aaKnown RBP2.97□□□□□ -1.93
SYNE1-212ENST00000423061 PSG11Q9UQ72 335 aa2.97□□□□□ -1.93
SYNE1-212ENST00000423061 TRBV24-1A0A075B6N3 115 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 C11orf94C9JXX5 98 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 SLC17A2O00624 439 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 PDLIM4P50479 330 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 EIF3IQ13347 325 aaKnown RBP2.96□□□□□ -1.93
SYNE1-212ENST00000423061 CMC2Q9NRP2 79 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 HELTA6NFD8 242 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 C9orf172C9J069 976 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 SLC25A6P12236 298 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 CPMP14384 443 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 IL3RAP26951 378 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 RPS20P60866 119 aaKnown RBP2.96□□□□□ -1.93
SYNE1-212ENST00000423061 POU3F1Q03052 451 aaPredicted RBP2.96□□□□□ -1.93
SYNE1-212ENST00000423061 GLIPR1L1Q6UWM5 242 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 CLEC1AQ8NC01 280 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 GATAD1Q8WUU5 269 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 NPFFR1Q9GZQ6 430 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 KIR2DL5BA0A0G2JN68 375 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 KIR2DL5BA0A0G2JPC4 375 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 NPIPB5A8MRT5 1133 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 ZNF816Q0VGE8 651 aaPredicted RBP2.96□□□□□ -1.93
SYNE1-212ENST00000423061 RUNX2Q13950 521 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 KIR2DL5AQ8N109 375 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 IL23AQ9NPF7 189 aa2.96□□□□□ -1.93
SYNE1-212ENST00000423061 MRM2Q9UI43 246 aaKnown RBP2.96□□□□□ -1.93
SYNE1-212ENST00000423061 CSRP3P50461 194 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 UBE2NP61088 152 aaKnown RBP2.96□□□□□ -1.94
SYNE1-212ENST00000423061 SPTSSAQ969W0 71 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 ARHGAP5-AS1Q96IT6 56 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 IGLV3-10A0A075B6K4 115 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 PSMB5P28074 263 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 RRADP55042 308 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 CD226Q15762 336 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 C3AR1Q16581 482 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 DIO2Q92813 273 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 OR8B2Q96RD0 313 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 C5orf66Q9H5L9 145 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 NRXN2Q9P2S2 1712 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 K7EP34 96 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 KLF7O75840 302 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-212ENST00000423061 P2RY1P47900 373 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 CRIM1Q9NZV1 1036 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 SIPA1L1O43166 1804 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 BCL6P41182 706 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 ASCL4Q6XD76 172 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 SP7Q8TDD2 431 aaPredicted RBP2.96□□□□□ -1.94
SYNE1-212ENST00000423061 SLC35A4Q96G79 324 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 GLIPR2Q9H4G4 154 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 MMP17Q9ULZ9 603 aa2.96□□□□□ -1.94
SYNE1-212ENST00000423061 FREM3P0C091 2139 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms