RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 HBG1P69891 147 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 HBG2P69892 147 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 TNFRSF9Q07011 255 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 ACSF3Q4G176 576 aaPredicted RBP18.08■□□□□ 0.48
USP48-205ENST00000421625 TEX38Q6PEX7 206 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 CENPVQ7Z7K6 275 aaPredicted RBP18.08■□□□□ 0.48
USP48-205ENST00000421625 YRDCQ86U90 279 aaKnown RBP18.08■□□□□ 0.48
USP48-205ENST00000421625 TAF15Q92804 592 aaKnown RBP eCLIP18.08■□□□□ 0.48
USP48-205ENST00000421625 SPSB4Q96A44 273 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 SF3B5Q9BWJ5 86 aaKnown RBP18.08■□□□□ 0.48
USP48-205ENST00000421625 A0A1W2PR80 420 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 ZNF716A6NP11 495 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 IGHV3-9P01782 118 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 CCNOP22674 350 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 S100GP29377 79 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 FAM3BP58499 235 aaPredicted RBP18.08■□□□□ 0.48
USP48-205ENST00000421625 ACTL10Q5JWF8 245 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 IL1F10Q8WWZ1 152 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 CLDN23Q96B33 292 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 ZNF488Q96MN9 340 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 CDX2Q99626 313 aaPredicted RBP18.08■□□□□ 0.48
USP48-205ENST00000421625 CBLN4Q9NTU7 201 aa18.08■□□□□ 0.48
USP48-205ENST00000421625 B4E171 279 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 HS3ST1O14792 307 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 TSPAN7P41732 249 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.07■□□□□ 0.48
USP48-205ENST00000421625 OR10J5Q8NHC4 309 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 RDH5Q92781 318 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 C1QTNF5Q9BXJ0 243 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 OR1A1Q9P1Q5 309 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 MRPS17Q9Y2R5 130 aaKnown RBP18.07■□□□□ 0.48
USP48-205ENST00000421625 SYNGR1O43759 233 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 CCL2P13500 99 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 RAC3P60763 192 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 TMEM18Q96B42 140 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 PINX1Q96BK5 328 aaKnown RBP18.07■□□□□ 0.48
USP48-205ENST00000421625 OR51I2Q9H344 312 aa18.07■□□□□ 0.48
USP48-205ENST00000421625 FGF5P12034 268 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 OR8G2PQ6IF36 304 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 ACSM6Q6P461 480 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 THOC3Q96J01 351 aaKnown RBP18.06■□□□□ 0.48
USP48-205ENST00000421625 PPP1R3CQ9UQK1 317 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 TRAV39A0A0B4J263 110 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 CXCL13O43927 109 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 ZNF16P17020 682 aaPredicted RBP18.06■□□□□ 0.48
USP48-205ENST00000421625 ZDHHC23Q8IYP9 409 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 CADM4Q8NFZ8 388 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 OR4F5Q8NH21 305 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 OR4F4Q96R69 305 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 GPR35Q9HC97 309 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 ZDBF2Q9HCK1 2354 aa18.06■□□□□ 0.48
USP48-205ENST00000421625 TRAPPC2LH3BP13 241 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 IGLV2-14P01704 120 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 CARD18P57730 90 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 SLC38A11Q08AI6 406 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 OR5T1Q8NG75 326 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 PSMB3P49720 205 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 GUSBP11Q6P575 273 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 OR10V1Q8NGI7 309 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 OR2T10Q8NGZ9 312 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 TMEM68Q96MH6 324 aa18.05■□□□□ 0.48
USP48-205ENST00000421625 A0A0G2JMM0 328 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 A0A1W2PPB8 328 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 A0A1W2PQM1 296 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 A0A1W2PRS3 328 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 KIR3DP1A8MWS1 328 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 B3GALT5-AS1P59052 145 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 PCBD1P61457 104 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 MRPL14Q6P1L8 145 aaKnown RBP18.04■□□□□ 0.48
USP48-205ENST00000421625 LSM10Q969L4 123 aaKnown RBP18.04■□□□□ 0.48
USP48-205ENST00000421625 OR6C3Q9NZP0 311 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 SOX15O60248 233 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 GYPAP02724 150 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 UBALD1Q8TB05 177 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 DIDO1Q9BTC0 2240 aaKnown RBP18.04■□□□□ 0.48
USP48-205ENST00000421625 A0A1B0GUS0 222 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 TOX3O15405 576 aaPredicted RBP18.04■□□□□ 0.48
USP48-205ENST00000421625 IQCJQ1A5X6 159 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 HLA-BQ31612 363 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 GGNQ86UU5 652 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 PRR18Q8N4B5 295 aa18.04■□□□□ 0.48
USP48-205ENST00000421625 IGHV5-10-1A0A0J9YXX1 117 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 TMEM250H0YL14 139 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 CCL7P80098 99 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 ZNF585BQ52M93 769 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 PRDM14Q9GZV8 571 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 GGCTO75223 188 aaKnown RBP18.03■□□□□ 0.48
USP48-205ENST00000421625 COX5BP10606 129 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 SSR4P51571 173 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 C9orf135Q5VTT2 229 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 MKXQ8IYA7 352 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 GBGT1Q8N5D6 347 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 PSMF1Q92530 271 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 NCKAP5O14513 1909 aa18.03■□□□□ 0.48
USP48-205ENST00000421625 CEP192Q8TEP8 1941 aa18.02■□□□□ 0.48
USP48-205ENST00000421625 IGHV1-45A0A0A0MS14 117 aa18.02■□□□□ 0.48
USP48-205ENST00000421625 TRAV24A0A0B4J272 114 aa18.02■□□□□ 0.48
USP48-205ENST00000421625 SCGB1D1O95968 90 aa18.02■□□□□ 0.48
USP48-205ENST00000421625 CEACAM21Q3KPI0 293 aa18.02■□□□□ 0.48
USP48-205ENST00000421625 REPIN1Q9BWE0 567 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms