RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 GLDNQ6ZMI3 551 aaPredicted RBP6.24□□□□□ -1.41
VIM-202ENST00000421459 Q8N1Y9 231 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 STX19Q8N4C7 294 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 NRG4Q8WWG1 115 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 CPNE2Q96FN4 548 aaPredicted RBP6.24□□□□□ -1.41
VIM-202ENST00000421459 CLCC1Q96S66 551 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 ZNF251Q9BRH9 671 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 FAM103A1Q9BTL3 118 aaKnown RBP6.24□□□□□ -1.41
VIM-202ENST00000421459 TOLLIPQ9H0E2 274 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 FBXL15Q9H469 300 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 ZMAT4Q9H898 229 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 RCC2Q9P258 522 aaKnown RBP6.24□□□□□ -1.41
VIM-202ENST00000421459 CLEC2DQ9UHP7 191 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 MRPS28Q9Y2Q9 187 aaKnown RBP6.24□□□□□ -1.41
VIM-202ENST00000421459 ORC6Q9Y5N6 252 aa6.24□□□□□ -1.41
VIM-202ENST00000421459 PNMA8CA0A1B0GUJ8 204 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 LOC100130705A0A1B0GUX0 176 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 SNTNA6NMZ2 147 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 OGG1O15527 345 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 TXNL1O43396 289 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 WBP4O75554 376 aaKnown RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 MAS1P04201 325 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 CD2P06729 351 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 OR5H8P0DN80 308 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 IGHV4-30-4P0DP06 118 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 LINC00205P59089 165 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 RPS11P62280 158 aaKnown RBP eCLIP6.23□□□□□ -1.41
VIM-202ENST00000421459 CX3CL1P78423 397 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 MRPL28Q13084 256 aaKnown RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 DOC2BQ14184 412 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 Q3ZCU0 254 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 C6orf183Q5T699 404 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 OGFRL1Q5TC84 451 aaPredicted RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 ACSM6Q6P461 480 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 RPL22L1Q6P5R6 122 aaKnown RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 LINC00596Q86U02 117 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 GAPTQ8N292 157 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 JAGN1Q8N5M9 183 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 NPBQ8NG41 125 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 MRPL30Q8TCC3 161 aaKnown RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 GHSRQ92847 366 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 FAM46BQ96A09 425 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 CITED4Q96RK1 184 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 TM2D3Q9BRN9 247 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 ABHD14AQ9BUJ0 271 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 SELENOIQ9C0D9 397 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 PARP12Q9H0J9 701 aaKnown RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 FGF20Q9NP95 211 aaPredicted RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 MRPS18AQ9NVS2 196 aaKnown RBP6.23□□□□□ -1.41
VIM-202ENST00000421459 KIAA1456Q9P272 454 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 ZNF580Q9UK33 172 aa6.23□□□□□ -1.41
VIM-202ENST00000421459 SAA2-SAA4A0A096LPE2 208 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 TRBV5-5A0A0J9YX44 114 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 ST8SIA5O15466 376 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 CRTAPO75718 401 aaPredicted RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 NDUFA3O95167 84 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 LGALS1P09382 135 aaKnown RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 SAA2P0DJI9 122 aaPredicted RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 CT45A6P0DMU7 189 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 CT45A5P0DMU8 189 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 CT45A7P0DMV0 189 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 DEFA5Q01523 94 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 RPL39P5Q59GN2 51 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 AWAT2Q6E213 333 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 OR10K2Q6IF99 312 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 FAM131AQ6UXB0 335 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 ZNF833PQ6ZTB9 187 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 ABHD5Q8WTS1 349 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 MRPS24Q96EL2 167 aaKnown RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 Q96MT0 163 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 OR14A2Q96R54 314 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 CHCHD6Q9BRQ6 235 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 IFI27L2Q9H2X8 130 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 KCNK15Q9H427 330 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 EDA2RQ9HAV5 297 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 MBNL3Q9NUK0 354 aaKnown RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 PAK1IP1Q9NWT1 392 aaPredicted RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 BABAM2Q9NXR7 383 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 ADAM30Q9UKF2 790 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 RPL36Q9Y3U8 105 aaKnown RBP6.22□□□□□ -1.41
VIM-202ENST00000421459 NUBP2Q9Y5Y2 271 aa6.22□□□□□ -1.41
VIM-202ENST00000421459 TRBV5-7A0A0A0MS05 114 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 LDLRAD4O15165 306 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 ZNF780AO75290 641 aaPredicted RBP6.21□□□□□ -1.42
VIM-202ENST00000421459 GPX5O75715 221 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 SC5DO75845 299 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 MGMTP16455 207 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 FUT3P21217 361 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 PLGLAQ15195 96 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 CCDC58Q4VC31 144 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 STEAP3Q658P3 488 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 DMKNQ6E0U4 476 aaPredicted RBP6.21□□□□□ -1.42
VIM-202ENST00000421459 PPP1R27Q86WC6 154 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 LYPD6Q86Y78 171 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 PACRGLQ8N7B6 248 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 LFNGQ8NES3 379 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 OR6Q1Q8NGQ2 317 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 IL1F10Q8WWZ1 152 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 SMIM19Q96E16 107 aa6.21□□□□□ -1.42
VIM-202ENST00000421459 ABHD14BQ96IU4 210 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms