RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 OR10A7Q8NGE5 316 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 BLNKQ8WV28 456 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 ST6GALNAC2Q9UJ37 374 aa9.23□□□□□ -0.93
PTCH1-206ENST00000421141 CTDSPLO15194 276 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 ATP6V1G1O75348 118 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 LALBAP00709 142 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 SPP1P10451 314 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 WDFY2Q96P53 400 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 SLC25A32Q9H2D1 315 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 METTL1Q9UBP6 276 aaKnown RBP9.22□□□□□ -0.93
PTCH1-206ENST00000421141 UMAD1C9J7I0 102 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 J3QR06 171 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 DHRS7BQ6IAN0 325 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-206ENST00000421141 BTNL8Q6UX41 500 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 SEZ6L2Q6UXD5 910 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 LOC390937A0A1W2PQ73 354 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 DCTN6O00399 190 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 METTL26Q96S19 204 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 Q9N2K0 584 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 FAM206AQ9NX38 181 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 OTOGLQ3ZCN5 2332 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 TM4SF5O14894 197 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 EGR4Q05215 589 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 GLDNQ6ZMI3 551 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-206ENST00000421141 OR8I2Q8N0Y5 310 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 OR1L1Q8NH94 360 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 WDR61Q9GZS3 305 aaKnown RBP9.22□□□□□ -0.93
PTCH1-206ENST00000421141 SLC2A9Q9NRM0 540 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 CALYQ9NYX4 217 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 IGKV3-7A0A075B6H7 116 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 C17orf100A8MU93 164 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 CSRP3P50461 194 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 A0A1W2PS18 150 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 HPRT1P00492 218 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 PPP1R1AQ13522 171 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 OR4C13Q8NGP0 309 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 C7orf69Q9H7B7 122 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 CLEC5AQ9NY25 188 aa9.22□□□□□ -0.93
PTCH1-206ENST00000421141 C4orf17Q53FE4 359 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 LAMTOR1Q6IAA8 161 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 OR5B3Q8NH48 314 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 SSC4DQ8WTU2 575 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 CHST1O43916 411 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 SLC25A5P05141 298 aaKnown RBP9.21□□□□□ -0.93
PTCH1-206ENST00000421141 CEBPDP49716 269 aaPredicted RBP9.21□□□□□ -0.93
PTCH1-206ENST00000421141 PDPNQ86YL7 162 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 TPRX1Q8N7U7 411 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 OR5P3Q8WZ94 311 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 CORTO00230 105 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 NANOS3P60323 173 aaKnown RBP9.21□□□□□ -0.93
PTCH1-206ENST00000421141 PEAR1Q5VY43 1037 aaPredicted RBP9.21□□□□□ -0.93
PTCH1-206ENST00000421141 OR9G1Q8NH87 305 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 MRGPRFQ96AM1 343 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 STARD4Q96DR4 205 aa9.21□□□□□ -0.93
PTCH1-206ENST00000421141 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-206ENST00000421141 A0A1W2PPE3 182 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 COMPP49747 757 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-206ENST00000421141 IL24Q13007 206 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 CCDC190Q86UF4 302 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 DRAXINQ8NBI3 349 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-206ENST00000421141 OR5C1Q8NGR4 320 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 OR2T10Q8NGZ9 312 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 DYRK2Q92630 601 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 DOK5Q9P104 306 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 PCNX3Q9H6A9 2034 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 ZNF729A6NN14 1252 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-206ENST00000421141 TRAPPC2P0DI81 140 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 TRAPPC2BP0DI82 140 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 PRR27Q6MZM9 219 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 MARC2Q969Z3 335 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 AICDAQ9GZX7 198 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 CREBBPQ92793 2442 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 VSIG8P0DPA2 414 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 HIST1H1EP10412 219 aaKnown RBP9.21□□□□□ -0.94
PTCH1-206ENST00000421141 G6PCP35575 357 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 CA7P43166 264 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 KIR3DL2P43630 455 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 OR10Z1Q8NGY1 313 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 CXorf58Q96LI9 332 aa9.21□□□□□ -0.94
PTCH1-206ENST00000421141 A0A1B0GU03 582 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 TMEM41BQ5BJD5 291 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 SCARB1Q8WTV0 552 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 MRPL24Q96A35 216 aaKnown RBP9.2□□□□□ -0.94
PTCH1-206ENST00000421141 DEPPQ9NTK1 212 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 NPY1RP25929 384 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 C11orf87Q6NUJ2 197 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 HIST2H3AQ71DI3 136 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 TCTEX1D1Q8N7M0 179 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 OR4A5Q8NH83 315 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 SLIRPQ9GZT3 109 aaKnown RBP9.2□□□□□ -0.94
PTCH1-206ENST00000421141 C1QTNF9BB2RNN3 333 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 C1QTNF9P0C862 333 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 NDUFA6P56556 154 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 ZNF273Q14593 569 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 BAK1Q16611 211 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 BMPERQ8N8U9 685 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 LINC00052Q96N35 136 aa9.2□□□□□ -0.94
PTCH1-206ENST00000421141 CCL28Q9NRJ3 127 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms