RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 A0A1W2PN81 502 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 TRIM64CA6NLI5 447 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 SOX15O60248 233 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 LGALS1P09382 135 aaKnown RBP13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 OR8U9P0C7N5 309 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 FUT3P21217 361 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 CHRNA7P36544 502 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 PPP1CCP36873 323 aaKnown RBP13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 CRIP2P52943 208 aaPredicted RBP13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 HTD2P86397 168 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 LY6G6FQ5SQ64 297 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 ZNF660Q6AZW8 331 aaPredicted RBP13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 ZNF833PQ6ZTB9 187 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 APH1BQ8WW43 257 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 ARPC1AQ92747 370 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 MUL1Q969V5 352 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 TM2D3Q9BRN9 247 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 BANF2Q9H503 90 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 BABAM2Q9NXR7 383 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 KIAA1456Q9P272 454 aa13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 FOXA2Q9Y261 457 aaPredicted RBP13.01□□□□□ -0.33
UPF3AP3-201ENST00000420996 TRAV8-7A0A075B6U6 113 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 IGHV4OR15-8A0A075B7B6 117 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 A0A087WW49 117 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 UBE2QL1A1L167 161 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 YPEL1O60688 119 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 RGS11O94810 467 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 DCKP27707 260 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 NDPQ00604 133 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 ECSCRQ19T08 205 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 Q499Y3 187 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 ZFP1Q6P2D0 407 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 CDH26Q8IXH8 852 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 JAGN1Q8N5M9 183 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 TCTEX1D1Q8N7M0 179 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 GHSRQ92847 366 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 RDH12Q96NR8 316 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 YPEL2Q96QA6 119 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 OR4C12Q96R67 309 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 SELENOIQ9C0D9 397 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 FBXO7Q9Y3I1 522 aa13□□□□□ -0.33
UPF3AP3-201ENST00000420996 LDLRAD4O15165 306 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 MAS1P04201 325 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 MGMTP16455 207 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 FSTP19883 344 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 OR3A3P47888 321 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 RPS11P62280 158 aaKnown RBP eCLIP12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 PITPNAQ00169 270 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 SMN1Q16637 294 aaKnown RBP12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 YIF1BQ5BJH7 314 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 DMKNQ6E0U4 476 aaPredicted RBP12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 AWAT2Q6E213 333 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 SIGIRRQ6IA17 410 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 C5orf24Q7Z6I8 188 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 MRPL30Q8TCC3 161 aaKnown RBP12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 FLYWCH2Q96CP2 140 aaKnown RBP12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 Q96M66 194 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 SLC29A1Q99808 456 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 C9orf16Q9BUW7 83 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 LRRC42Q9Y546 428 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 NUBP2Q9Y5Y2 271 aa12.99□□□□□ -0.33
UPF3AP3-201ENST00000420996 SAA2-SAA4A0A096LPE2 208 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 ARPC1BO15143 372 aaKnown RBP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 WBP4O75554 376 aaKnown RBP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 LALBAP00709 142 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 HSPB1P04792 205 aaKnown RBP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 SAA2P0DJI9 122 aaPredicted RBP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 EGR2P11161 476 aaPredicted RBP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 CX3CL1P78423 397 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 TMEM267Q0VDI3 215 aaPredicted RBP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 PYHIN1Q6K0P9 492 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 CASTOR1Q8WTX7 329 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 GALMQ96C23 342 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 FBXL15Q9H469 300 aa12.98□□□□□ -0.33
UPF3AP3-201ENST00000420996 TRBV5-7A0A0A0MS05 114 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 A8MZ25 164 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 RRHO14718 337 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 PDCD6O75340 191 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 CRTAPO75718 401 aaPredicted RBP12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 LRRC36Q1X8D7 754 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 FAM71F2Q6NXP2 309 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 CD200R1LQ6Q8B3 271 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 Q8N1Y9 231 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 OR2AK2Q8NG84 335 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 CYYR1Q96J86 154 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 EDA2RQ9HAV5 297 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 RNF150Q9ULK6 438 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 A3GALT2U3KPV4 340 aa12.97□□□□□ -0.33
UPF3AP3-201ENST00000420996 LYSTQ99698 3801 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 IRGMA1A4Y4 181 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 FCN1O00602 326 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 HSPA12AO43301 675 aa12.96□□□□□ -0.33
UPF3AP3-201ENST00000420996 MYL12AP19105 171 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms