RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FGFRL1Q8N441 504 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 OR10V1Q8NGI7 309 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 GALNT14Q96FL9 552 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 UNKLQ9H9P5 680 aaKnown RBP11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 OR1A1Q9P1Q5 309 aa11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A0B4J2A0 478 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A1B0GVG6 124 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 RAB7AP51149 207 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 LUMP51884 338 aaPredicted RBP11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF626Q68DY1 528 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 C11orf88Q6PI97 169 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 LINC00311Q8N616 119 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF439Q8NDP4 499 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 CLDND2Q8NHS1 167 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 TNFRSF14Q92956 283 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 TMPRSS13Q9BYE2 586 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 GPN1Q9HCN4 374 aaPredicted RBP11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 SHPKQ9UHJ6 478 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 C14orf166Q9Y224 244 aaKnown RBP11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 USF3Q68DE3 2245 aa11.72□□□□□ -0.53
SHMT1P1-201ENST00000419974 LOC105371242A0A075B767 164 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A0A6YYJ9 748 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 IGKV1D-13A0A0B4J2D9 117 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 hCG_1809904A0A1W2PP81 198 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A1W2PPE2 198 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A1W2PR64 198 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 A0A1W2PRV1 198 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 VGLL3A8MV65 326 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 GPR31O00270 319 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 FOXH1O75593 365 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 IGLV2-14P01704 120 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 PPIAL4GP0DN37 164 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 IGKV1-13P0DP09 117 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 VSIG10L2P0DP72 767 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 ANXA7P20073 488 aaKnown RBP11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 BCAP31P51572 246 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 RIPPLY3P57055 190 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 CARTPTQ16568 116 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 C5orf24Q7Z6I8 188 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 CMTM1Q8IZ96 169 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 CADM3Q8N126 398 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 PRR18Q8N4B5 295 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 OR52L2PQ8NGH6 319 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 H1FXQ92522 213 aaKnown RBP11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 TMEM230Q96A57 120 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 PERPQ96FX8 193 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 SLC2A9Q9NRM0 540 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 FAM212BQ9NTI7 297 aaPredicted RBP11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 MTORP42345 2549 aa11.71□□□□□ -0.53
SHMT1P1-201ENST00000419974 ZFHX3Q15911 3703 aa11.71□□□□□ -0.54
SHMT1P1-201ENST00000419974 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 CRYM-AS1A6NIL9 109 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 C22orf46C9J442 243 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 ENSAO43768 121 aaKnown RBP11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 CREBL2O60519 120 aaPredicted RBP11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 DUS4LO95620 317 aaKnown RBP11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 RLN1P04808 185 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 DHRS2Q13268 280 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 EIF4EBP1Q13541 118 aaPredicted RBP11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 SLC25A48Q6ZT89 311 aaKnown RBP11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 LYG2Q86SG7 212 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF645Q8N7E2 425 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 RFESDQ8TAC1 157 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF431Q8TF32 576 aaPredicted RBP11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 MITD1Q8WV92 249 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 SLC5A7Q9GZV3 580 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 GNG12Q9UBI6 72 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 KPTNQ9Y664 436 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 ALG5Q9Y673 324 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 SESN1Q9Y6P5 492 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 DSCAML1Q8TD84 2053 aa11.7□□□□□ -0.54
SHMT1P1-201ENST00000419974 A0A096LNT2 108 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 C9orf170A2RU37 121 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 CD99P14209 185 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 PGAM2P15259 253 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 HLA-GP17693 338 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 S100GP29377 79 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 PPP1CCP36873 323 aaKnown RBP11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF137PP52743 207 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 PIGPP57054 158 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 SUPT4H1P63272 117 aaKnown RBP11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 GNMTQ14749 295 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 CLEC12BQ2HXU8 276 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 ZNF818PQ6ZRF7 136 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 TCTEX1D1Q8N7M0 179 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 LRTM2Q8N967 370 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 OR2AK2Q8NG84 335 aa11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 RTN4IP1Q8WWV3 396 aaPredicted RBP11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
SHMT1P1-201ENST00000419974 IGHV4-30-2A0A087WSY4 118 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 IGHV4-61A0A0C4DH41 118 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 HMX3A6NHT5 357 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 MPPED1O15442 326 aa11.68□□□□□ -0.54
SHMT1P1-201ENST00000419974 SFT2D2O95562 160 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms