RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 HIST1H2BDP58876 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST1H2BCP62807 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 ZNF266Q14584 549 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST2H2BEQ16778 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 ZNF674Q2M3X9 581 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.91□□□□□ -0.66
LINC00642-201ENST00000419459 TMEM108Q6UXF1 575 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 DOK3Q7L591 496 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST3H2BBQ8N257 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 OR51T1Q8NGJ9 327 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 OR10D4PQ8NGN7 298 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST1H2BHQ93079 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 MRPL24Q96A35 216 aaKnown RBP10.91□□□□□ -0.66
LINC00642-201ENST00000419459 APOBEC3DQ96AK3 386 aaPredicted RBP10.91□□□□□ -0.66
LINC00642-201ENST00000419459 PLPPR2Q96GM1 343 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 GPER1Q99527 375 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST1H2BNQ99877 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 HIST1H2BMQ99879 126 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 C2orf88Q9BSF0 95 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 PARP12Q9H0J9 701 aaKnown RBP10.91□□□□□ -0.66
LINC00642-201ENST00000419459 BANF2Q9H503 90 aa10.91□□□□□ -0.66
LINC00642-201ENST00000419459 DUSP1P28562 367 aa10.9□□□□□ -0.66
LINC00642-201ENST00000419459 TAGLN2P37802 199 aaKnown RBP10.9□□□□□ -0.66
LINC00642-201ENST00000419459 SLC35E3Q7Z769 313 aa10.9□□□□□ -0.66
LINC00642-201ENST00000419459 FAM169BQ8N8A8 192 aa10.9□□□□□ -0.66
LINC00642-201ENST00000419459 RAB39BQ96DA2 213 aa10.9□□□□□ -0.66
LINC00642-201ENST00000419459 MARS2Q96GW9 593 aaKnown RBP10.9□□□□□ -0.66
LINC00642-201ENST00000419459 PECRQ9BY49 303 aa10.9□□□□□ -0.66
LINC00642-201ENST00000419459 WFDC1Q9HC57 220 aa10.9□□□□□ -0.66
LINC00642-201ENST00000419459 J3QKU1 62 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 LILRA1O75019 489 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 PLAUP00749 431 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 HSPB1P04792 205 aaKnown RBP10.89□□□□□ -0.67
LINC00642-201ENST00000419459 FAHP16930 419 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 UBE2KP61086 200 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 PPP1CBP62140 327 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 RSU1Q15404 277 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 MSMPQ1L6U9 139 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 OR10G4Q8NGN3 311 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 FAM213BQ8TBF2 198 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 SLC25A40Q8TBP6 338 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 Q8WTZ3 238 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 NEUROG1Q92886 237 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 TVP23CQ96ET8 276 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 TMEM242Q9NWH2 141 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 A0A0U1RQV5 110 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 A0A1B0GV90 55 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 LY86O95711 162 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 IGLV3-1P01715 115 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
LINC00642-201ENST00000419459 MPV17P39210 176 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 GLIPR1P48060 266 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 FHITP49789 147 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 FABP6P51161 128 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 SPCS3P61009 180 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 ALKBH6Q3KRA9 238 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 FIP1L1Q6UN15 594 aaKnown RBP10.89□□□□□ -0.67
LINC00642-201ENST00000419459 NIPSNAP3BQ9BS92 247 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 ZNF2Q9BSG1 426 aaPredicted RBP10.89□□□□□ -0.67
LINC00642-201ENST00000419459 NAA60Q9H7X0 242 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 MMP24Q9Y5R2 645 aa10.89□□□□□ -0.67
LINC00642-201ENST00000419459 CACNA1DQ01668 2161 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 A0A087X0M5 115 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 A0A1B0GX30 115 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 HSD17B6O14756 317 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 SRP19P09132 144 aaKnown RBP10.88□□□□□ -0.67
LINC00642-201ENST00000419459 SERPINA2P20848 420 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 PPP1CCP36873 323 aaKnown RBP10.88□□□□□ -0.67
LINC00642-201ENST00000419459 TMEM187Q14656 261 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 SSX2Q16385 188 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 OR2T2Q6IF00 324 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 OR56B2PQ8NGI1 322 aa10.88□□□□□ -0.67
LINC00642-201ENST00000419459 KLF14Q8TD94 323 aaPredicted RBP10.88□□□□□ -0.67
LINC00642-201ENST00000419459 RBMXL1Q96E39 390 aaKnown RBP10.88□□□□□ -0.67
LINC00642-201ENST00000419459 hCG_38984A0A1B0GV85 526 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 FAM230AA0A1W2PPH8 454 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 DHRS3O75911 302 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 CLDN1O95832 211 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 MALLQ13021 153 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 GNMTQ14749 295 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 KHDC3LQ587J8 217 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 DPPA3Q6W0C5 159 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
LINC00642-201ENST00000419459 MRPL21Q7Z2W9 205 aaKnown RBP10.87□□□□□ -0.67
LINC00642-201ENST00000419459 LRP11Q86VZ4 500 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
LINC00642-201ENST00000419459 RAB24Q969Q5 203 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 RCC1LQ96I51 464 aaKnown RBP10.87□□□□□ -0.67
LINC00642-201ENST00000419459 C18orf12Q96KH6 178 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 SPACA5Q96QH8 159 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
LINC00642-201ENST00000419459 SH3BGRL3Q9H299 93 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 PIGLQ9Y2B2 252 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 PTPN13Q12923 2485 aa10.87□□□□□ -0.67
LINC00642-201ENST00000419459 A0A1W2PP11 408 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms