RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 IGHV3-43A0A0B4J1X8 118 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 IGKV1D-13A0A0B4J2D9 117 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 KBTBD11-OT1A0A1B0GTJ5 212 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 DUXBA0A1W2PPF3 345 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 LYNX1G3V0Z9 82 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 H0Y980 276 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 FAM229AH3BQW9 127 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 C15orf65H3BRN8 121 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 DVL1O14640 695 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 HSD17B6O14756 317 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 PHF1O43189 567 aaPredicted RBP4.94□□□□□ -1.62
HMGB3-202ENST00000419110 PET100P0DJ07 73 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 IGHV3-43DP0DP04 118 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 IGKV1-13P0DP09 117 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 LYNX1P0DP58 116 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 GZMHP20718 246 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 PPP1CCP36873 323 aaKnown RBP4.94□□□□□ -1.62
HMGB3-202ENST00000419110 GPR12P47775 334 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 RAP2BP61225 183 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 LTC4SQ16873 150 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 Q3ZCU0 254 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ESCO2Q56NI9 601 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 PRAMEF5Q5TYX0 476 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 CLEC2AQ6UVW9 174 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF818PQ6ZRF7 136 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 KCTD9Q7L273 389 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 TCF23Q7RTU1 214 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF645Q8N7E2 425 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ZBTB34Q8NCN2 500 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 OR11H7Q8NGC8 314 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 OR10A7Q8NGE5 316 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 RNASE11Q8TAA1 199 aaKnown RBP4.94□□□□□ -1.62
HMGB3-202ENST00000419110 GALNT14Q96FL9 552 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 DMRTB1Q96MA1 342 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 SPIN2AQ99865 258 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 SPIN2BQ9BPZ2 258 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 PIMREGQ9BSJ6 248 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ABHD14AQ9BUJ0 271 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF436Q9C0F3 470 aaPredicted RBP4.94□□□□□ -1.62
HMGB3-202ENST00000419110 RANGRFQ9HD47 186 aaPredicted RBP4.94□□□□□ -1.62
HMGB3-202ENST00000419110 TPSG1Q9NRR2 321 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 C19orf12Q9NSK7 152 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 GFOD1Q9NXC2 390 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 IDI2-AS1Q9NZ38 188 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 COMMD9Q9P000 198 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 CTSZQ9UBR2 303 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 KCNIP3Q9Y2W7 256 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 RELNP78509 3460 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 ARID1AO14497 2285 aa4.94□□□□□ -1.62
HMGB3-202ENST00000419110 hCG_1809904A0A1W2PP81 198 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 A0A1W2PPE2 198 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 A0A1W2PR64 198 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 A0A1W2PRV1 198 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 MEX3AA1L020 520 aaKnown RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CLEC18AA5D8T8 446 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 FAM25EA8MYX2 175 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 F5H0A9 414 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 NDUFS8O00217 210 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CCSO14618 274 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 ITGB1BP1O14713 200 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 YPEL1O60688 119 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 LY6HO94772 140 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 IFNA21P01568 189 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 C1QBP02746 253 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 RBP4P02753 201 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 HEXAP06865 529 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR5AC1P0C628 307 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR8U9P0C7N5 309 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 NFYBP25208 207 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 IL3RAP26951 378 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 SSTR2P30874 369 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CEACAM6P40199 344 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 TMEM33P57088 247 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 GNB2P62879 340 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 SUPT4H1P63272 117 aaKnown RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 DHODHQ02127 395 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF273Q14593 569 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CR1LQ2VPA4 569 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 THOC7Q6I9Y2 204 aaKnown RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CLEC18BQ6UXF7 455 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 GSG1LQ6UXU4 331 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 TBC1D26Q86UD7 250 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 LGI3Q8N145 548 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CLEC18CQ8NCF0 446 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 BVESQ8NE79 360 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR52L2PQ8NGH6 319 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR52M1Q8NGK5 317 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR2T35Q8NGX2 323 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR8U1Q8NH10 309 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 OR51H1Q8NH63 302 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 CORO2AQ92828 525 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 AKR1E2Q96JD6 320 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 ST6GAL2Q96JF0 529 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 YPEL2Q96QA6 119 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 FYTTD1Q96QD9 318 aaKnown RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 RTBDNQ9BSG5 229 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 DCTN5Q9BTE1 182 aa4.93□□□□□ -1.62
HMGB3-202ENST00000419110 SSBP3Q9BWW4 388 aaPredicted RBP4.93□□□□□ -1.62
HMGB3-202ENST00000419110 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms