RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 SDHAF2Q9NX18 166 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 FBXL17Q9UF56 701 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 SH3BGRL2Q9UJC5 107 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 JPT1Q9UK76 154 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 PKDREJQ9NTG1 2253 aa7.55□□□□□ -1.2
LINCMD1-201ENST00000418518 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 A8MXK9 166 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 SHISA9B4DS77 424 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 SPINT2O43291 252 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 ADAM20O43506 726 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 TFF1P04155 84 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 OR4A8P0C604 315 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 OR8U9P0C7N5 309 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 P0C879 139 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 MUC1P15941 1255 aaPredicted RBP7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 TNFRSF1AP19438 455 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 CD80P33681 288 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 TMEM33P57088 247 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 GNMTQ14749 295 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 EFNB3Q15768 340 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 SWI5Q1ZZU3 235 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 TMEM30BQ3MIR4 351 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 THOC7Q6I9Y2 204 aaKnown RBP7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 ZNF66Q6ZN08 573 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 ZNF788Q6ZQV5 615 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 FAM219AQ8IW50 185 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 DMRTC2Q8IXT2 367 aaPredicted RBP7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 OR8U1Q8NH10 309 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 RNASE6Q93091 150 aaKnown RBP7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 WFIKKN1Q96NZ8 548 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 GAFA1Q96PS6 74 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 GPHA2Q96T91 129 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 PRORYQ9H606 182 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 PLEKHF2Q9H8W4 249 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 RAB9BQ9NP90 201 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 COA4Q9NYJ1 87 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 OR6C3Q9NZP0 311 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 RNF115Q9Y4L5 304 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 ATRXP46100 2492 aa7.54□□□□□ -1.2
LINCMD1-201ENST00000418518 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 TRGV8A0A0C4DH27 118 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 A0A0G2JRQ6 117 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 FAM90A26D6RGX4 464 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 SHOXO15266 292 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 SIGLEC5O15389 551 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 TNFSF12O43508 249 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 YPEL1O60688 119 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 JTBO76095 146 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 SCGB1D2O95969 90 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 IGKV1-5P01602 117 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 SERPINE2P07093 398 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 FAM157CP0CG43 387 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 PVALBP20472 110 aaPredicted RBP7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 CHRNB4P30926 498 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 SSTR5P35346 364 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 PPP1CCP36873 323 aaKnown RBP7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 LOXL3P58215 753 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 CATR1Q13166 79 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 FAM74A1Q5RGS3 127 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 RPL7L1Q6DKI1 246 aaKnown RBP7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 FOXRED2Q8IWF2 684 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 PRR18Q8N4B5 295 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 OR52L2PQ8NGH6 319 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 OR51H1Q8NH63 302 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 UBALD1Q8TB05 177 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 EDARADDQ8WWZ3 215 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 CORO2AQ92828 525 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 NINJ1Q92982 152 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 ARL11Q969Q4 196 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 GPR146Q96CH1 333 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 YPEL2Q96QA6 119 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 AGMATQ9BSE5 352 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 OR2D2Q9H210 308 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 ESRP2Q9H6T0 727 aaKnown RBP7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 LYRM2Q9NU23 88 aaPredicted RBP7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 KCNS2Q9ULS6 477 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 HIVEP3Q5T1R4 2406 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 NCOR2Q9Y618 2525 aa7.53□□□□□ -1.2
LINCMD1-201ENST00000418518 DOCK11Q5JSL3 2073 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 VSTM5A8MXK1 200 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 NUDT19A8MXV4 375 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 LGALS8O00214 317 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 SFTPCP11686 197 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 ZP3P21754 424 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 SULT1A2P50226 295 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 POLR2GP62487 172 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 EWSR1Q01844 656 aaKnown RBP eCLIP7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 BAXQ07812 192 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 CXorf66Q5JRM2 361 aaPredicted RBP7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 EIF5AL1Q6IS14 154 aaKnown RBP7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 ODF3L1Q8IXM7 274 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 ZNF295-AS1Q8N0V1 137 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 OR2C3Q8N628 320 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 TPRX1Q8N7U7 411 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 TMED6Q8WW62 240 aa7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 SAT2Q96F10 170 aaPredicted RBP7.52□□□□□ -1.21
LINCMD1-201ENST00000418518 SMIM8Q96KF7 97 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms