RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 ISOC2Q96AB3 205 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 REEP6Q96HR9 211 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 BPESC1Q9GZL8 116 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 POLR2J2Q9GZM3 115 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 MOB1AQ9H8S9 216 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 REEP1Q9H902 201 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 MTHFD2LQ9H903 347 aaPredicted RBP4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 CDH20Q9HBT6 801 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 TUBG2Q9NRH3 451 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 CA10Q9NS85 328 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM38BQ9NVV0 291 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 TAS2R8Q9NYW2 309 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 CISD1Q9NZ45 108 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 ABRACLQ9P1F3 81 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 CLCF1Q9UBD9 225 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 RAB22AQ9UL26 194 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 FLVCR2Q9UPI3 526 aa4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 RPL36Q9Y3U8 105 aaKnown RBP4.61□□□□□ -1.67
ECHDC1-206ENST00000417628 UBR4Q5T4S7 5183 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 TRBV5-3A0A0A0MS03 114 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 A0A0B4J2A0 478 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 IGHV1-69-2A0A0G2JMI3 117 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 TRBV7-9A0A0J9YWB2 115 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 A0A1W2PPE2 198 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 A4D1N5 150 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 OR5B21A6NL26 309 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 C2CD4BA6NLJ0 364 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 M0R036 132 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 GOSR2O14653 212 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF208O43345 1280 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 XRCC3O43542 346 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 OR1F1O43749 312 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 JTBO76095 146 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 OR2C1O95371 312 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 RAB36O95755 333 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 IFNA5P01569 189 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 GBAP04062 536 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ARG1P05089 322 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 HLA-DQB2P05538 268 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 OR5G3P0C626 314 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 NHLRC4P0CG21 123 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 PPIAL4GP0DN37 164 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 COX7A2P14406 83 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF19P17023 458 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ELK1P19419 428 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 GSTM3P21266 225 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 KITLGP21583 273 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 RPS10P46783 165 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 AKR1C2P52895 323 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 UBE2NP61088 152 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 HIST1H3AP68431 136 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 SSBP1Q04837 148 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 BAXQ07812 192 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF154Q13106 437 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 RBM39Q14498 530 aaKnown RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 MEF2DQ14814 521 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 VAMP3Q15836 100 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 MEP1BQ16820 701 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZSWIM7Q19AV6 140 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM176BQ3YBM2 270 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ANXA2RQ3ZCQ2 193 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 SPIN3Q5JUX0 258 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 CTSL3PQ5NE16 218 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 OR2T2Q6IF00 324 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ADNP2Q6IQ32 1131 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 PRSS54Q6PEW0 395 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 SMARCD3Q6STE5 483 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 BTNL8Q6UX41 500 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 Q6ZTK2 550 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 COMMD6Q7Z4G1 85 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF546Q86UE3 836 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 PAQR4Q8N4S7 273 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 FAM24BQ8N5W8 94 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 TEX26Q8N6G2 289 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 LINC01555Q8NAE3 123 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 SLC16A11Q8NCK7 471 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 APCDD1LQ8NCL9 501 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 NFAM1Q8NET5 270 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 OR52L1Q8NGH7 329 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF519Q8TB69 540 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 TAF15Q92804 592 aaKnown RBP eCLIP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 BCL2L2Q92843 193 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 MCHR2Q969V1 340 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 TMEM186Q96B77 213 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 MRAP2Q96G30 205 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 BTF3L4Q96K17 158 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 RITA1Q96K30 269 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 DUX5Q96PT3 197 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 RASL10BQ96S79 203 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 B9D2Q9BPU9 175 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 FNDC11Q9BVV2 318 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ZNF471Q9BX82 626 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 ATG5Q9H1Y0 275 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 C1orf198Q9H425 327 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 BPIFA1Q9NP55 256 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 FGF20Q9NP95 211 aaPredicted RBP4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 SHPKQ9UHJ6 478 aa4.6□□□□□ -1.67
ECHDC1-206ENST00000417628 MRPS16Q9Y3D3 137 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms