RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	LTC4S	Q16873	150 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	ZNF260	Q3ZCT1	412 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	C5orf24	Q7Z6I8	188 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	RPE	Q96AT9	228 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	CMSS1	Q9BQ75	279 aa	Known RBP	13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	MIXL1	Q9H2W2	232 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	DIABLO	Q9NR28	239 aa		13.11	□□□□□ -0.31
DDR1-231	ENST00000417521	TMEM235	A6NFC5	223 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	RGS5	O15539	181 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	OR2F2	O95006	317 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	IGHV3-7	P01780	117 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	VSIG10L2	P0DP72	767 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	PTHLH	P12272	177 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	CD24	P25063	80 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	MADCAM1	Q13477	382 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	HABP2	Q14520	560 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	C2orf68	Q2NKX9	166 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	THNSL2	Q86YJ6	484 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	LAX1	Q8IWV1	398 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	MCFD2	Q8NI22	146 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	SETD6	Q8TBK2	473 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	CAPSL	Q8WWF8	208 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	LEAP2	Q969E1	77 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	TOMM40L	Q969M1	308 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	CMTM3	Q96MX0	182 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	RAB9B	Q9NP90	201 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	C12orf4	Q9NQ89	552 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
DDR1-231	ENST00000417521		A0A0A6YYH2	397 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521		A6NJ64	397 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	FAM90A9P	A6NNJ1	464 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	SERPINE3	A8MV23	424 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	FAM25A	B3EWG3	89 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	FAM25C	B3EWG5	89 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	FAM25G	B3EWG6	89 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	C12orf77	C9JDV5	145 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	XRCC3	O43542	346 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	CD3G	P09693	182 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	RAB7A	P51149	207 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	ARFRP1	Q13795	201 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521		Q3ZCU0	254 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	TMEM69	Q5SWH9	247 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	HACD4	Q5VWC8	232 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	C8orf31	Q8N9H6	132 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	NUDCD2	Q8WVJ2	157 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	RBM14	Q96PK6	669 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	WNT10A	Q9GZT5	417 aa		13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	MBNL3	Q9NUK0	354 aa	Known RBP	13.1	□□□□□ -0.31
DDR1-231	ENST00000417521	MEGF8	Q7Z7M0	2845 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	GSTP1	P09211	210 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	FAM106CP	P0CH98	169 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	GNG10	P50151	68 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	TAS2R20	P59543	309 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	TMEM30B	Q3MIR4	351 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	C6orf183	Q5T699	404 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	ZNF880	Q6PDB4	577 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	TRAT1	Q6PIZ9	186 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521		Q6ZS46	218 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	OR8H3	Q8N146	312 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	PRR18	Q8N4B5	295 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	LINC00311	Q8N616	119 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	OR10X1	Q8NGY0	326 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	SLC25A33	Q9BSK2	321 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	NXF2	Q9GZY0	626 aa	Known RBP	13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	AUNIP	Q9H7T9	357 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	TAF9B	Q9HBM6	251 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	GFOD1	Q9NXC2	390 aa		13.09	□□□□□ -0.31
DDR1-231	ENST00000417521	TRBV6-6	A0A0A6YYG2	114 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521		M0QZK8	103 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	SDCBP	O00560	298 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	SPINT2	O43291	252 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	SSX5	O60225	188 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	PEX14	O75381	377 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	CSF1	P09603	554 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	LOXL3	P58215	753 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	MRPS15	P82914	257 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	ARL6IP1	Q15041	203 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	ZNF554	Q86TJ5	538 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	C11orf44	Q8N8P7	122 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	OR1L1	Q8NH94	360 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	WIPF2	Q8TF74	440 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	MAFIP	Q8WZ33	124 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	OCSTAMP	Q9BR26	566 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	RIMS4	Q9H426	269 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521		Q9N2K0	584 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	KCNIP1	Q9NZI2	227 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	EXTL2	Q9UBQ6	330 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	ZNF230	Q9UIE0	474 aa	Predicted RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	MRPS7	Q9Y2R9	242 aa	Known RBP	13.08	□□□□□ -0.32
DDR1-231	ENST00000417521	VWF	P04275	2813 aa		13.08	□□□□□ -0.32
DDR1-231	ENST00000417521		A0A1W2PPI3	338 aa		13.07	□□□□□ -0.32
DDR1-231	ENST00000417521	TSPAN15	O95858	294 aa		13.07	□□□□□ -0.32
DDR1-231	ENST00000417521	FCGR3A	P08637	254 aa		13.07	□□□□□ -0.32
DDR1-231	ENST00000417521	TALDO1	P37837	337 aa		13.07	□□□□□ -0.32
DDR1-231	ENST00000417521	VDAC2	P45880	294 aa	Predicted RBP	13.07	□□□□□ -0.32
DDR1-231	ENST00000417521	GNG2	P59768	71 aa		13.07	□□□□□ -0.32
DDR1-231	ENST00000417521	CMYA5	Q8N3K9	4069 aa		13.07	□□□□□ -0.32

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